Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M6 Luminal_UniqueNum	BreastC_M6 Luminal_pVal	BreastC_M6 Luminal_Unique	ColonC_M7 GobletCell_UniqueNum	ColonC_M7 GobletCell_pVal	ColonC_M7 GobletCell_Unique
BASAKI_YBX1_TARGETS_DN	19	ARRB1|CA12|FAM214A|FLRT3|HGD|MUC1|NFKBIZ|PGPEP1|RAP1GAP|RBM47|SEMA4B|SERPINA1|SLC1A1|SLC2A10|SLC22A18|SYTL2|TMC5|TP53INP1|TSPAN1	3.19918776556e-08	54	5.99035160012e-08	AMN1|ANKRD50|ARSD|ASMTL|ASPH|ATP7A|BDH2|BHLHE40|CAMK2N1|CERS6|CGNL1|COBLL1|CRYZL2P|CUEDC1|DCAF16|DEPTOR|DNAH12|DUSP5|DYNC2H1|EEF1A1|ESR1|FAM110C|GDF15|GLCCI1|GOLGA2P5|GPD1L|HES1|IL6ST|KCTD6|KDM4B|LOC93622|MAST4|MEGF9|MGAT4A|MZF1|NEBL|P4HTM|PCSK6|PIK3R1|PRKAB1|PSD3|RAB3IP|SLC30A1|SLC40A1|SSBP4|STC1|STMN3|STOX1|TNFSF10|TSC22D3|UCP2|VAV3|VPS13B|WDR1	28	4.08023931005e-09	ACSM3|ALDOC|ASS1|C2ORF88|CD55|CLINT1|CRYBG1|CRYM|DMXL2|DPP4|ETV5|GAL3ST1|HK2|LCN2|MALL|MBOAT2|MMP7|MRAP2|NDRG1|NT5E|PAPSS2|SCIN|SERPINB1|SLPI|SMARCA2|SMPDL3A|TM4SF4|TNFRSF11A
BENPORATH_SUZ12_TARGETS	18	C1ORF115|CRIP1|DUSP4|EPB41L4A|EPHA10|FOXA1|GNA14|HES2|HOXD1|INSM1|KCNJ3|KIAA1324|RIPK3|SDR16C5|SIDT1|SMIM14|SPATA18|TCEA3	1.39657172623e-05	119	1.97722165369e-05	ABCC6|ABCC8|ACSS1|ADAMTS15|ADGRB2|ADRB1|AKR7A2|ANKRD20A11P|ASCL1|ASTN2|BCL2|BTG2|C1ORF194|CACNA1D|CAMK2N1|CDC20B|CHRD|CHST8|CITED1|CLIC6|CLSTN2|COL4A5|COL4A6|COMMD3|CTNND2|CTPS2|CYP4X1|DACH1|DLX1|DLX2|DNAJC22|EMX1|ERBB4|ESPN|FAM129A|FBP1|FGF13|FLT3|FOXD2|FOXJ1|GADD45G|GATA2|GATA3|GATM|GFRA1|GPC4|GPR83|GREB1L|GRIA2|GRIK3|GSC|GUCY1A2|GUCY2D|HHAT|HOXD4|HOXD8|HS6ST3|IGSF21|IRX3|IRX5|KAZALD1|KCND3|KCNMA1|KIAA1211L|LCORL|LEF1|LETM2|LMX1B|LRP2|MAATS1|MAPK8IP2|MAPT|MCOLN3|MKX|NFIA|NKD1|NKX3-1|NPAS1|NPNT|NPY1R|OVOL1|PAX2|PAX9|PDE8B|PGR|PIGV|PPP1R13B|PTGER3|PTPRT|PYCARD|RAI2|RASEF|RBBP7|REPS2|RHOB|SLC1A2|SLC1A4|SLC10A4|SLC27A2|SLC40A1|SORCS1|SSTR2|STK32B|SYT12|SYTL4|TBX3|TBX22|TCEAL1|TCEAL3|TMEM26|TMEM164|TPPP3|TRH|TRIM36|TSC22D3|UCN|ZADH2|ZNF436-AS1|ZNF703	60	8.15921798775e-06	ALDH1L1|ATOH1|B4GALNT2|BRINP3|CD44|CDKN2C|CXCL1|CYP2J2|DUOX2|DUOXA2|EDN3|EPHA4|EVA1C|FFAR4|FOXA2|FRMD3|GATA6|GDA|GFI1|HBA2|HPCAL1|IL7|INSRR|ISL1|KIRREL3|KLF4|LAMA3|LONRF3|MFSD4A|MGLL|MT1H|MT1M|MT1X|NDNF|NDRG1|NKX2-2|NOL4|NOXO1|OSR2|PKP1|PLPPR1|PLXNA2|PTGDR|PTGER2|PTGER4|PXMP2|RARRES1|SLC6A20|SLC9A2|SQOR|SSTR1|TACSTD2|TBL1X|TMEM30B|TMEM54|TNFRSF11A|VDR|VSIG2|VWA3B|ZMYND15
BERNARD_PPAPDC1B_TARGETS_DN	4	FGFR2|RAP1GAP|SERPINA1|TFF3	0.000236968193118	12	0.000129881159963	ACOT6|CISH|HIP1|IFT122|IL6ST|KIF5C|PRLR|RARA|SPRED2|STC1|STC2|ZNF703	6	0.000344055226274	GPR153|MT1X|PLCE1|RHOF|SYT13|TBC1D2
BHAT_ESR1_TARGETS_NOT_VIA_AKT1_DN	8	ATP1B1|CGN|OSBPL10|SHROOM3|SLC22A23|SLITRK6|SPTSSB|SYTL2	1.73328165656e-05	19	2.23268376205e-07	BTG2|CDYL2|CFAP206|CYB5D2|ENPP1|ESR1|GATA3|KIAA1211L|PBX1|PSD3|RNF43|RXRA|S1PR3|SASH1|SLC16A5|SLC29A3|TSC22D3|TUFT1|YPEL2	7	3.44423647549e-05	CD55|CDH3|DLL1|EFNB2|EPHA4|MAP3K5|TLE1
BHAT_ESR1_TARGETS_VIA_AKT1_DN	6	ATP1B1|BCAR3|CGN|SHROOM3|SLC22A23|SYTL2	0.000520837344058	13	0.000801248689486	ABCC5|CDYL2|CFAP206|EHF|ESR1|MKX|PSD3|S1PR3|SASH1|SLC16A5|SLC29A3|TRIM45|YPEL2	7	0.00024042599863	AFAP1L2|BLNK|CDH3|DLL1|EFNB2|PPL|TLE1
CERVERA_SDHB_TARGETS_1_UP	9	DUSP4|EPS8L1|FAM149A|GOLM1|LIPH|SLC1A1|ST6GALNAC2|TNNT1|UGT2B15	2.86155346399e-05	18	5.59345536568e-05	ABLIM2|ASCL1|C16ORF45|CACNB3|CDC20B|CLIC6|DNAAF3|FAM81B|GALNT16|IGFBP2|LMLN|LONRF2|LYPD6B|NBDY|PTGER3|REEP1|SH3BGRL|TANC2	11	1.29651562307e-06	ANXA13|EMP2|FHL2|IL18|KRT17|KRT80|LAMC2|MEGF6|PLBD1|TMEM54|VDR
CHANDRAN_METASTASIS_DN	8	ADIRF|BCAS1|FGFR2|GOLM1|IQGAP2|SYTL1|TSPAN15|WFDC2	0.000219716038803	45	0.000107921134394	ANXA11|AZGP1|BBOF1|BMP4|BTG2|C11ORF52|CNST|CUEDC1|CYBRD1|DNALI1|DYNC1I2|EPB41L5|FAM3B|FBXO2|FGF13|GLI3|HSPB8|IDNK|IGFBP2|KIAA1191|LFNG|LINC00339|MAGED2|MAN2B2|MCC|MEIS3P1|MISP|NECAB3|NFIA|PIFO|PIGT|PSD3|PTPRN2|PYCARD|RAB27B|RBM24|RNF43|ROBO2|SEMA3C|SFT2D3|SMIM1|STARD13|TBC1D9B|THSD4|TMEM150C	22	0.000331510943212	ACYP2|ANTXR2|ASAP3|DPP4|EVA1C|GSTA4|HEXA|ISL1|KLF3|KLF4|KLK10|KLK11|MCTP2|MEGF6|NDNF|PKP1|RARRES1|SERPINB5|SLMAP|TRIM29|UPK3A|VSIG2
CHARAFE_BREAST_CANCER_BASAL_VS_MESENCHYMAL_UP	10	EPB41L4A|EPN3|KIAA0040|MUC1|S100A14|S100P|SERPINA3|SPINT1|SYTL1|TC2N	0.000152100433145	16	0.000304200866289	CDS1|DUSP16|EHF|FXYD3|LOC93622|MARVELD2|MPP7|OVOL1|PROM2|PRR15L|RHOD|RNF43|SCNN1A|SSH3|TSC22D3|TSTD1	23	4.71221618763e-16	ADGRF1|AKR1B10|BLNK|C1ORF116|C6ORF132|CDH3|CRYBG1|DIRC2|DMKN|DSG3|GJB3|KCNK1|KLK6|LCN2|OVOL2|PDZK1IP1|PPL|PRSS8|SERPINB5|SLPI|TACSTD2|TMEM30B|TRIM29
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_UP	35	ADCY6|AGR2|ARRB1|BCAS1|C9ORF152|CA12|CACFD1|CAPN9|CREB3L1|CREB3L4|DNAJC1|DOPEY2|EPN3|EPS8L1|FOXA1|HID1|KIAA0040|KIAA1211|KIAA1324|KRT19|MLPH|NECTIN2|RSPH1|SIDT1|SLC2A10|SLC44A4|SPDEF|TC2N|TFF1|TFF3|TJP3|TSPAN13|TSPAN15|VIPR1|XBP1	4.00379844097e-10	139	6.54596011558e-73	ABCG1|ACVR1B|ADGRB2|AFF3|ANKRD30A|ANXA9|AR|ARFGEF3|ARFIP2|ARHGEF26|ASB8|ASTN2|BCOR|C10ORF82|C17ORF58|CACNA1D|CACNA2D2|CACNB3|CACNG4|CAMSAP3|CANT1|CCND1|CERS2|CERS6|CISH|CLSTN2|CSRNP2|CTNND2|CTXN1|CXXC5|CYB561|DACH1|DEGS2|DEPTOR|DLG3|DNALI1|EFR3B|ELOVL2|ENPP1|ERBB3|ERGIC1|ESR1|ETNK2|EVL|F7|FAM110B|FAM234B|FGFR4|FRS2|GALNT6|GAMT|GATA3|GOLT1A|GPD1L|GPR160|GPRC5C|HECTD4|HMG20B|HMGCS2|HPN|HPX|INPP5J|IVD|KAT6B|KDM4B|KIAA0232|KIF12|KLHDC9|LARGE1|LFNG|LINC01128|LNX1|LOC100130987|LONRF2|MAGED2|MAPT|MCCC2|MEGF9|MGAT4A|MTERF2|MYB|MYO6|NKAIN1|NPDC1|P4HTM|PATZ1|PBX1|PGR|PLEKHH1|PPP2R2C|PREX1|PRLR|PRRT2|PRRT3|RAB3D|RAB17|RALGPS1|RGL2|RHOB|RIIAD1|RND1|RNF103|SCUBE2|SEC16A|SH3GLB2|SHTN1|SLC1A4|SLC4A8|SLC7A8|SLC9A3R1|SLC16A6|SLC25A29|SLC38A1|STARD10|SYNE4|SYNGR2|TADA2B|TAPT1|TBC1D30|TBX3|THSD4|TLE3|TMBIM6|TMEM80|TMEM150C|TMEM184A|TMEM229B|TMEM268|TNRC18|TRIL|TRIM3|TRPS1|TTC9|TTC39A|VPS37C|WFS1|ZBTB42|ZNF467|ZNF703	14	8.00759688194e-10	ATP2C2|BLNK|C4ORF19|EMP2|GRAMD4|HIP1R|HK2|KCTD15|NUCB2|RHBDF1|SIDT2|SLC35A1|SLC37A1|TBL1X
CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_UP	50	ADCY6|ADIRF|AGR2|BCAS1|C9ORF152|CA12|CACFD1|CADPS2|CAPN8|CGN|CNNM4|CREB3L4|CRIP1|DHRS4-AS1|DNAJC1|EPB41L4A|EPN3|EPS8L1|FAM174B|FAM214A|FOXA1|HID1|KIAA0040|KIAA1324|KRT19|MLPH|MUC1|PLEKHA6|PRODH|RBM47|RSPH1|S100A14|S100P|SIDT1|SPDEF|SPINT1|ST6GALNAC2|SYTL1|TC2N|TFF1|TFF3|TJP3|TMC4|TMEM45B|TRPM4|TSPAN1|TSPAN13|VIPR1|XBP1|ZG16B	5.2750487009e-21	149	1.08119533676e-79	ABAT|ABCA12|ABCC11|ABCG1|ACVR1B|ALDH3B2|ALDH4A1|ANKRD30A|ANXA9|AP1M2|ARFGEF3|ARFIP2|ARRDC1|ASB8|AZGP1|BICDL1|C11ORF52|CACNA1D|CACNB3|CACNG4|CAMK2N1|CAMSAP3|CDS1|CEACAM6|CERS6|COMMD3|CRABP2|CRIP2|CRNDE|CSAD|CTNND2|CXORF40A|CXORF40B|CYB5A|CYB561|CYP4B1|DCAF11|DEGS2|DLG3|DOK7|DUSP16|EFHD1|EHF|ENPP5|EPB41L5|ERBB3|ESR1|FAAH|FAM102A|FBP1|FGD3|FXYD3|GALNT6|GATA3|GGT6|GOLT1A|GPD1L|GPR160|H2AFJ|IGFBP2|INPP5J|IRX5|ITPK1|JUP|KIAA1211L|LMTK3|LNX1|LOC93622|LYPD3|MARVELD2|MCCC2|MEGF9|MGAT4A|MGMT|MKNK2|MMEL1|MPP7|MREG|MRFAP1L1|MSX2|MYB|MYO6|NEBL|NPDC1|OVOL1|P4HTM|PATJ|PATZ1|PER2|PGAP2|PIP4K2C|PPDPF|PPM1H|PREX1|PRLR|PROM2|PRR15|PRR15L|RAB3D|RAB5B|RAB17|RAB27B|RALGPS1|RASEF|RERG|RGL2|RHOB|RMND5B|RNF103|SELENBP1|SEMA3F|SLC7A8|SLC9A3R1|SLC16A14|SLC25A29|SORL1|SPOPL|SSH3|STARD10|SULT2B1|SUOX|SYNE4|SYNGR2|TADA2B|TBC1D30|TLE3|TMBIM4|TMBIM6|TMED3|TMEM125|TMEM184A|TMEM229B|TMEM268|TOX3|TP53TG1|TRIL|TRIM3|TRPS1|TSC22D3|TSTD1|TTC9|TTC39A|TUFT1|VAV3|WFS1|ZBTB7B|ZBTB42|ZNF385A|ZNF467	25	1.05500974018e-20	ATP2C2|BICDL2|BLNK|C4ORF19|C6ORF132|CDH3|CLN3|CRYBG2|DENND2D|EMP2|FA2H|GRAMD4|HIP1R|MB|NECTIN4|OVOL2|PGAP3|PRSS8|RHBDF1|RPS6KA5|SLC35A1|SLC37A1|TMEM30B|TMPRSS2|TNK2
CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_DN	15	C1ORF210|CLDN12|DNAJC1|EPS8L1|LYG1|OSBPL10|RBM47|SLC44A4|SPTLC3|SYTL2|TJP3|TMC4|TSPAN1|UBXN10|WFDC2	3.66221836298e-07	68	1.15198927142e-11	ADCY9|AKAP5|ALDH3A2|ANXA11|AR|ASTN2|BBS4|C11ORF52|C15ORF59|CAMTA1|CASP9|CCDC30|CCDC57|CCDC148|CDS1|CFAP69|CLIC6|COBL|CST6|CYB5D2|DEGS2|DNAJC16|EFCAB6|EPB41L5|FAAH|FAM81B|FAM110B|FHDC1|FMO5|GATAD1|GATM|GLB1L|GPRC5C|IP6K2|IQCH|IRX3|KIAA1211L|KIF9|LMTK3|LRPAP1|NFIA|NRXN3|OSCP1|P4HTM|PAX2|PHYHD1|PIGV|PKHD1|PRKAA2|PRR15L|RAB3IP|RETREG1|RGS12|SCNN1A|SPRYD3|SUMF2|SYNE4|TM7SF3|TMEM125|TNFSF10|TRIL|VPS37D|VWA5A|WDFY3|WDR48|WDR78|ZBED5-AS1|ZMYND12	27	7.32432152704e-07	ACSS2|AHR|AIF1L|ASRGL1|C6ORF132|CDKN1A|CYP4V2|EDAR|FBXL16|FUT3|FUT6|GMDS|IFT140|KLF4|LCN2|MMP15|MSLN|PPL|PROM1|PRSS8|RGP1|SLC2A13|SLC6A20|SLC39A8|SLPI|TPK1|TRIOBP
COLDREN_GEFITINIB_RESISTANCE_DN	28	AGR2|C1ORF21|CAPN8|CCDC149|CGN|EPN3|EPS8L1|FOXA1|KIAA0040|KRT19|LIPH|LRG1|MBOAT1|PTK6|RBM47|S100A14|S100A16|SLC1A1|SPINT1|SPTLC3|SYTL1|SYTL5|TC2N|TJP3|TMC4|TMC5|TMEM45B|TSPAN1	3.91661669193e-16	39	7.83323338385e-16	AIG1|ANXA9|AP1M2|ARFGEF3|CCDC57|CCDC115|CDS1|COBLL1|CST6|DOK7|EHF|ENPP4|ENPP5|ERBB3|FXYD3|GPR160|HMGCL|KIAA1211L|LNX1|MPP7|MYO6|NPNT|OVOL1|PRR15L|PRRG2|PSD4|RAB38|RASEF|REPS2|RHOD|SLC35A3|SMIM22|SPOPL|STARD10|STK39|SYNE4|TMEM125|VAV3|ZNF91	36	4.66439279079e-31	ACPP|ADGRF1|ATP2C2|B3GNT3|BICDL2|BLNK|C1ORF116|C6ORF132|CCNG2|CDH3|CRYBG1|CRYBG2|CYP2J2|ENDOD1|EPS8L2|GRAMD1C|GRHL3|GUK1|HS3ST1|KLK6|LAMC2|LIMA1|MST1R|NECTIN4|OVOL2|PITPNM3|PPL|PRSS8|SCEL|SERPINB5|SPINK2|TACSTD2|TMEM30B|TMEM54|TMPRSS4|TTC22
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3	38	ATP1B1|BCAS1|C2ORF72|CFB|CGN|CIB1|CLDN12|CORO2A|CRIP1|DUSP4|EPN3|ETFDH|FCGBP|GALNT7|GNA14|GOLGB1|GOLM1|MUC1|NTN4|OSBPL10|PDLIM5|PGPEP1|PLEKHS1|PTK6|QSOX1|S100P|SCGB2A1|STEAP1|STEAP2|STS|TC2N|TCEA3|TMC5|TMEM45B|TRAK1|TSPAN1|VIPR1|WFDC2	7.445209243e-08	81	1.4890418486e-07	ADRB1|AGAP1|AMIGO1|ARFGEF3|ARHGAP44|ASAH1|ASPH|ATG16L1|ATP7B|BBS4|BPIFB1|CCDC30|CCDC160|CDRT4|CDS1|CEACAM5|CEACAM6|CFAP44|CLGN|CNDP2|CRISP2|CRISP3|CYB5A|DHCR24|EHF|ENTPD3|FAM110C|FAM129A|FRY|GALNT6|GDF15|GLT8D1|GPC4|GPCPD1|GPR143|HMGCS2|KCNE4|KCNS3|KIAA0232|KLHDC7A|LIMCH1|LRPAP1|LRRC6|LRRC31|MEAF6|MISP|MTHFR|NANS|NCEH1|NKX3-1|PAK6|PAX9|PCSK6|PLIN5|PRKAB1|PRR15|PRRT3|PTPN13|PTPRN2|RBKS|SASH1|SCNN1A|SELENBP1|SH2D4A|SH3RF1|SLC12A2|SLC16A14|SLC27A2|SLC35D2|SLC44A5|STK39|SYT17|TACC2|TAF1A-AS1|TBC1D9B|TMBIM6|TMTC2|TOX3|TSHZ1|WDR72|YIPF1	87	6.75699200275e-36	ABCC3|ADGRF1|AHR|AK1|APPL2|ARFGAP3|ARHGAP26|ARHGEF28|ATP2C2|B3GNT3|B3GNT7|B4GALT4|BACE2|BICDL2|C1ORF106|C1ORF116|C3ORF70|C4BPA|C4ORF19|CAPN2|CAPN5|CASP7|CAST|CD55|CLIC5|CLINT1|CLMN|CRYM|CYP2C18|CYP3A5|DIRC2|DMXL2|ELL2|EPS8L2|ERLEC1|F5|FAM114A1|FUT3|FUT6|GALNT5|GALNT12|GMDS|GNE|GRAMD4|GSTA1|HS3ST1|INPP1|LCN2|LGR4|LIF|LONRF3|LRIG3|LYZ|MALL|MARCH3|MFSD4A|MUC4|MUC13|NAMPT|OLFM4|PAG1|PFKFB2|PGM1|PITPNM3|PLD1|PPL|PTPRH|RAB26|RAB27A|RGP1|RNF145|SERPINB1|SGMS1|SLC2A13|SLC4A11|SLC7A14|SLC37A1|SLPI|SMCO4|SRD5A3|ST6GALNAC1|STIM2|TBC1D2|TCN1|TMEM263|TMPRSS2|TRNP1
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5	26	ACADSB|AGR2|ARRB1|BCAS1|C1ORF115|CAPN9|CORO2A|CPEB2|DOPEY2|EPB41L4A|EPN3|GALNT7|HSPA2|MARC2|MUC1|PGPEP1|PLEKHS1|PLLP|PTK6|SMIM14|TC2N|TMEM45B|TRAK1|TSPAN1|TSPAN13|UGDH	8.00560917071e-14	77	1.59202237765e-13	AACS|ABCC5|ALCAM|ALDH3B2|ARFGEF3|ARHGEF37|ASAH1|ATP6V1G1|BCAM|CCDC160|CDS1|CEACAM5|CEACAM6|COBLL1|COL28A1|CRISP3|CTNND2|CXORF40A|DHCR24|DRAIC|ENPP1|ERBB4|FAM110C|FAM129A|FAM198B|FAM234B|FAM241A|FBP1|FGF12|FGF13|GATA2|GDF15|GLCCI1|GPR160|HTR7P1|KCNMA1|LFNG|LIMCH1|LNX1|LRPAP1|MTA3|NCEH1|NEBL|NOSTRIN|NXPH1|PALM3|PBX1|PBX3|PIP4K2C|PLK2|PP14571|PROM2|PRR15L|PRRT3|PSD3|PTPN13|RAB27B|RAI2|REEP1|RNF103|SASH1|SC5D|SCCPDH|SERHL2|SGSM1|SH3BGRL|SH3BP4|SLC12A2|SPRED2|TBC1D30|TMEM87B|TMEM135|TRIM62|TTC9|VPS13B|YIPF1|ZNF827	43	9.09945649149e-16	AHR|ANXA3|AQP3|ARF4|ARFGAP3|ATP2A3|ATP2C2|ATP8A1|BLNK|C3ORF70|CAP1|CD55|CDH3|COPB2|DAG1|EFNB2|EGLN3|ELL2|FAM114A1|FOXP1|GATA6|GRAMD4|HIP1R|INPP1|KDELR3|KLF3|LIMA1|MB|MGLL|NACC2|NUCB2|PLBD1|RASD1|RHBDF1|RHOA|S100A13|SLC4A11|SLC41A2|SQOR|ST3GAL4|TACSTD2|TMEM50B|TMPRSS2
DOANE_BREAST_CANCER_CLASSES_UP	12	AGR2|C1ORF115|FAM174B|FOXA1|GALNT7|HGD|MLPH|SIDT1|SPDEF|TFF3|TNIK|XBP1	3.98229329115e-06	39	2.94058606304e-35	ABCA12|ABCC6|ALCAM|ALDH3B2|ALDH4A1|AR|AZGP1|C16ORF45|CEACAM6|CERS4|CRAT|CRISP3|CYB5A|CYP4F8|DCXR|DHRS2|FASN|FGFR4|GALNT6|GPD1L|HMGCS2|HPX|KCNMA1|KIAA0485|LRIG1|LRRC31|PBLD|PEX11A|PIP|PRLR|RHOB|RND1|SCUBE2|SERHL2|TBC1D9|TFAP2B|TOX3|TRIL|TRIM3	2	7.9645865823e-06	BRINP3|FA2H
DOANE_BREAST_CANCER_ESR1_UP	28	ACADSB|ADIRF|AGR2|C1ORF21|CA12|CFB|CRIP1|DNAJC12|DUSP4|EPS8L1|FOXA1|GALNT7|GPRC5A|INPP4B|KIAA1324|KRT18|MLPH|MUC1|SIDT1|SLC44A4|SPDEF|TFF1|TFF3|TJP3|TMC5|TNNT1|TSPAN1|XBP1	4.08106843557e-13	77	2.73019279043e-96	ABAT|ACOX2|ALCAM|ANXA9|AR|AREG|ARMT1|AZGP1|BCL2|BMPR1B|C9ORF116|CACNA1D|CACNG4|CCDC170|CELSR1|CERS4|CHAD|CLGN|CLSTN2|CYBRD1|CYP2B7P|DACH1|DHRS2|DNALI1|EEF1A2|ELOVL2|ERBB4|ESR1|EVL|FBP1|GAMT|GATA3|GDF15|GFRA1|GREB1|IFT122|KCNE4|KCNK15|MAPT|MAST4|MYB|MYO6|NAT1|PBX1|PDZK1|PEX11A|PGR|PIP|PNPLA4|PP14571|RET|RHOB|RND1|SCCPDH|SCGB1D2|SCGB2A2|SCNN1A|SCUBE2|SELENBP1|SEMA3C|SERPINA5|SLC4A8|SLC7A8|SLC16A6|SLC27A2|SLC39A6|SSH3|STC2|STK32B|SYBU|SYT1|SYT17|TBC1D9|TOX3|TTC39A|UGCG|VAV3	0	8.16213687114e-13	
DOANE_RESPONSE_TO_ANDROGEN_UP	8	ARRB1|FAM174B|FLNB|GPRC5A|IQGAP2|S100P|TMC5|UGT2B28	1.15899371031e-05	31	9.57403589211e-06	AFF1|AKAP5|ALCAM|ALDH4A1|AZGP1|BBOF1|BCAM|CACNG4|CNTNAP2|COBL|CROT|CYP4F8|DALRD3|FASN|FMO5|GGTLC1|KDM4B|MAPT|MCCC2|NEDD4L|PIP|POLD4|PRKAR2B|RND1|SEC14L2|SERHL2|SIGLEC15|SLC19A2|SORD|TTC12|WWC1	16	1.3605838314e-05	ACSM3|AQP3|ARHGAP26|C1ORF116|ENDOD1|FKBP11|FUT3|FUT6|GMDS|GPA33|NDRG1|PDIA5|RASAL1|RNF125|SLC50A1|TMPRSS2
ENGELMANN_CANCER_PROGENITORS_DN	7	AGR3|CORO2A|HSPA2|S100P|ST6GALNAC2|TFF3|UGDH	4.74845730066e-05	14	1.90681899385e-06	ADCY1|BMP4|BNIPL|CEACAM6|EVL|FAM102A|FGFR3|IGSF1|RBM4B|SCUBE2|SFXN2|SYBU|SYTL4|VPS37D	5	9.30623270194e-05	ABCC3|CD44|CLIC3|KLK6|RASAL1
ERB2_UP.V1_UP	15	C1ORF115|CADPS2|DUSP4|EPB41L4A|FAM174B|HSPA2|MUC1|PGPEP1|S100P|SERPINA1|SLC2A10|ST6GALNAC2|TNNT1|TSPAN1|VIPR1	5.33098894843e-09	32	1.06619769526e-08	ABCG1|ALDH4A1|APH1B|ARNT2|ASPH|BCAM|BCL6|BMPR1B|CAMK2N1|CEACAM5|CEACAM6|DBNDD2|DHRS7B|ENO2|FAM129A|FGF13|FGFR4|FMO5|GAMT|GDF15|KCNMA1|LIMCH1|MGAT4A|MSX2|PPP1R3C|SCCPDH|SERHL2|SH3GLB2|SLC12A2|TCEA2|TTC9|ZNF467	26	9.44253688383e-16	ABCC3|AKR1B10|ALDOC|AQP3|BACE2|CA8|CAPN2|CAPN5|CAST|CLMN|EGLN3|ETV5|GALNT12|HSD17B11|MALL|MAOA|METRN|NDRG1|PAPSS2|PDE4D|PLEKHB1|PTGER4|TNFRSF11B|TNFRSF21|TPK1|VASP
ESC_J1_UP_EARLY.V1_UP	6	C1ORF210|CORO2A|P2RX4|TFF3|TSPAN1|ZBTB7C	0.000682395728579	27	0.00076092342135	ABCG1|ACSS1|ADSSL1|BNIPL|C10ORF82|CACNB3|CARD19|CDKN1B|DBNDD2|DPP7|ENPP5|FLT3|FXYD3|GADD45G|HIVEP3|IRX2|MAG|MYB|NECAB3|PCSK4|PIK3R1|RETREG1|SCNN1A|STC1|TLE6|TMED3|TSHZ1	14	0.000603868035808	ADTRP|AQP3|C4BPA|CDH3|CRELD1|DLL1|FOSL1|NDRG1|NHSL1|PRSS8|PRSS12|PTGER4|SLC18A1|ZIC2
FARMER_BREAST_CANCER_APOCRINE_VS_BASAL	25	CADPS2|CASD1|DUSP4|DUSP10|EGF|FAM174B|FOXA1|GALNT7|HGD|INPP4B|KIAA1324|KRT18|MLPH|PTK6|QSOX1|RBM47|RETSAT|SIDT1|SLC2A10|SLC22A18|SPDEF|TSPAN13|UGDH|UGT2B28|XBP1	4.98165839213e-08	84	6.2078234785e-29	ABCA12|ABCC5|ABCC6|ACOX2|ACSS3|AKAP9|AKR1A1|ALCAM|ALDH3B2|AR|ARFIP2|ATP6V1G1|ATP7A|AZGP1|BBS1|C16ORF45|CERS4|CERS6|CLGN|CNTNAP2|CRAT|CRISP3|CROT|CYB5A|CYB561|CYP4F8|DALRD3|DCXR|DHCR24|DHRS2|EFHD1|ELOVL5|ERBB4|ESRRG|FAH|FAM234B|FASN|FMO5|GGTLC1|GNMT|GPD1L|HMGCS2|KCNMA1|KDM4B|LIMCH1|LONP2|LRBA|MAGED2|MAPT|MKNK2|MSX2|NANS|P2RY2|PDLIM1|PEX11A|PIK3R1|PIP|PON2|PRKAR2B|PRLR|PRR15L|RHOB|RND1|SC5D|SCNN1A|SERHL2|SH3BP4|SIGLEC15|SLC9A3R1|SLC19A2|SLC26A3|SLC35A3|SLC38A1|SPRED2|SREBF1|TFAP2B|TMEM135|TP53TG1|TRAK2|TRIL|TRIM36|TSC22D3|UCP2|VWA5A	16	9.96331678426e-08	BRINP3|CLN3|CYP2J2|GABRP|KRT6B|LIMA1|MAOA|PAPSS2|PKP1|PLEKHB1|PROM1|S100A2|S100A13|SERPINB5|TMPRSS2|TNFRSF21
FARMER_BREAST_CANCER_APOCRINE_VS_LUMINAL	11	ABHD2|BAG1|C3ORF52|FGFR2|HGD|QSOX1|S100A14|ST6GALNAC2|TFF1|TFF3|UGT2B28	9.16529714997e-08	79	3.35008299548e-18	ABCA12|ABCC5|ABCC6|AKR1A1|ALCAM|ALDH3B2|ANXA9|AR|ARL3|ARNT2|ASB13|ATP7A|AZGP1|BCL2|BTG2|C2CD5|C5ORF30|CACNA2D2|CDKN1B|CLSTN2|CRABP2|CROT|CYB5A|DCAF10|DHCR24|DNALI1|EFHD1|ELOVL2|ENO2|ESR1|EVL|FASN|GATA3|GFRA1|GGTLC1|GNMT|GREB1|HDGFL3|IGF1R|IL6ST|KCNK15|KCNMA1|LIMCH1|MDM2|MED13L|MEIS3P1|MKNK2|MSX2|MZT2A|NPY1R|PCSK6|PDLIM1|PFKM|PIP|PLCL1|PON2|PRKAR2B|RAB38|RALGPS1|RAMP1|RMND1|SCCPDH|SCGB1D2|SCUBE2|SERHL2|SERPINA5|SPRED2|STK32B|STK39|TACC2|TBC1D9|TBX3|TESMIN|TFAP2B|TRIM36|TRPS1|UCP2|ULK2|WDR19	29	1.83305942996e-07	AKR1B10|ASS1|BLNK|BRINP3|CLIC3|CRYBG1|CYP2J2|ERO1A|HSD17B2|MAOA|MAP3K5|MARCH3|NAMPT|NDNF|NDRG1|PAPSS2|PDZK1IP1|PI3|PLEKHB1|S100A13|SGMS1|SLPI|SMCO4|SMPDL3A|STYK1|TBL1X|TLE1|TMPRSS2|TSPAN8
FARMER_BREAST_CANCER_BASAL_VS_LULMINAL	34	ACADSB|ADIRF|AGR2|BLVRA|CA12|CAPN9|CRIP1|DNAJC1|DNAJC12|ECI2|FAM174B|FOXA1|FUT8|GALNT7|INPP4B|KIAA1324|KRT8|KRT18|MLPH|NQO1|RBM47|RETSAT|SIDT1|SLC2A10|SLC22A18|SLC44A4|SPDEF|ST6GALNAC2|TFAP2A|TFF1|TFF3|TSPAN1|TSPAN13|XBP1	1.4923973529e-11	100	2.64468375909e-47	ABAT|AKR7A3|ANXA9|APBB2|AR|AREG|ARMT1|ATP7B|BBOF1|BBS1|BCL2|C5ORF30|CACNA2D2|CANT1|CELSR1|CERS6|CPB1|CYP2B7P|DACH1|DALRD3|DCXR|DHRS2|DNALI1|EFHC1|ERBB4|ESR1|EVL|FAM234B|FASN|FBP1|FBXL7|FMO5|FYCO1|GALNT6|GAMT|GATA3|GDF15|GFRA1|GPD1L|GREB1|HHAT|HSPB1|IL6ST|IRS1|KCNK15|KDM4B|KIAA0232|KIF16B|LONP2|LRBA|MAGED2|MAPT|MCCC2|MRFAP1L1|MYB|NAT1|P4HTM|PAAF1|PBX1|PDZK1|PEX11A|PP14571|PRR15L|PTGER3|RABEP1|RARA|REEP1|RET|RHOB|RND1|RNF43|SCCPDH|SCNN1A|SCUBE2|SEMA3C|SEMA3F|SERPINA5|SLC7A8|SLC9A3R1|SLC16A6|SLC19A2|SLC39A6|SPRED2|SREBF1|SYBU|SYNC|TBC1D9|TBX3|TCEAL1|TCEAL4|TESMIN|TMEM135|TPBG|TSC22D3|TTC39A|UGCG|VPS37C|WDR19|WFS1|WWP1	14	2.98479470579e-11	ART3|CD44|CLCN4|GABRP|HS3ST1|KRT6B|LIMA1|PFKP|PI3|PKP1|RARRES1|SERPINB5|SMCO4|TRIM29
FARMER_BREAST_CANCER_CLUSTER_6	6	AGR2|FOXA1|MLPH|RBM47|TSPAN13|XBP1	4.40088826796e-05	9	3.40407322701e-14	CERS6|ESR1|GATA3|GPD1L|KIAA0232|RHOB|SLC39A6|TBC1D9|TTC39A	0	8.80177653251e-05	
FRASOR_RESPONSE_TO_ESTRADIOL_DN	6	ADIRF|BCAS1|DUSP4|GPRC5A|MUC1|RAP1GAP	4.8426325201e-06	17	7.46368439948e-06	ABCC5|ABCG1|ALDH4A1|ARNT2|BMP4|COL4A5|ERBB3|FMO5|IER3|INPP5J|PLK2|PPP1R3C|PVALB|SELENBP1|SLC16A5|STC1|TTC9	10	2.22158064071e-06	ANXA3|BAK1|BLNK|ECH1|GNE|MATN2|MB|NDRG1|STXBP1|TM4SF1
GOZGIT_ESR1_TARGETS_DN	62	ABHD2|ABLIM1|AGR2|AGR3|ATP1B1|BCAS1|BLVRA|C6ORF141|C9ORF152|CA12|CAPN9|CFB|CPEB2|CRACR2A|DNAJC12|DUSP10|FGFR2|FLRT3|FOXA1|FUT8|GNA14|HAGLR|HID1|INPP4B|KCNJ3|KCNK6|KIAA1324|LOXL1-AS1|MBOAT1|MLPH|NECTIN2|NFKBIZ|NUDT16|PDLIM5|PGPEP1|PKIB|PLEKHS1|PLLP|SDR16C5|SERPINA1|SERPINA3|SHROOM3|SIDT1|SLC1A1|SLC2A10|SLITRK6|SMIM14|SPTSSB|SYTL1|SYTL2|SYTL5|TC2N|TFF1|TFF3|TMEM45B|TSPAN1|TSPAN13|TSPAN15|UGDH|UGT2B15|XBP1|ZG16B	8.2843407675e-27	153	3.70793330276e-47	ABAT|ABCA12|ADAMTS19|ADCY1|ADCY9|AFF3|AKAP5|ALCAM|ANKRD50|APBB2|AR|AREG|ARFGEF3|ARMT1|ATRNL1|BCL6|BMPR1B|C11ORF52|CACNG4|CAP2|CCDC83|CCDC170|CEACAM5|CEACAM6|CELSR2|CERS6|COBLL1|COL4A5|CRABP2|CRISP3|CTNND2|CTSF|CUEDC1|DACH1|DCDC2|DEGS2|DEPTOR|DGKD|EEF1A2|ELP2|ENPP1|EPB41L1|EPB41L5|ERBB4|ESR1|EVL|FAM102A|FAM198B|FAM241A|FBP1|FGF13|FUT8-AS1|GAD1|GATA3|GDF15|GFRA1|GPATCH2|GPC4|GREB1|GRIK3|GSTT1|HDGFL3|ICA1L|IFITM10|IFT122|IGF1R|IRS1|IRX5|LARGE1|LIN7A|LINC00052|LOC100147773|LURAP1L|MACROD2|MAST4|MCOLN3|MS4A15|MSMB|MYO6|NAT1|NEBL|NINJ1|NPNT|OLFM1|PATJ|PCDH10|PCSK6|PDZK1|PGR|PLK2|POF1B|PP14571|PPP1R3C|PRLR|PRR15L|PRRT3|PSD3|PTPN13|PYCARD|RAB27B|RABEP1|RAI1|RARA|RERG|RET|RGS22|RNF43|SCCPDH|SCNN1A|SCUBE2|SELENBP1|SEMA3C|SERPINA5|SFXN2|SH3BGRL|SHROOM2|SIGLEC15|SLC1A2|SLC7A2|SLC12A2|SLC16A6|SLC16A14|SLC19A2|SLC25A29|SLC27A2|SLC39A6|SMIM22|SPRED2|STC1|STC2|STMN3|STON2|SYT1|TANC2|TBC1D9|TCEAL1|TCEAL3|THSD4|TIGD6|TMEM150C|TMTC2|TNFSF10|TOM1L2|TP53TG1|TRPS1|TSC22D3|TTC9|TTC39A|UCP2|UGCG|VAV3|YPEL2|ZPLD1	50	1.6568681535e-26	AHCYL2|AHR|ATP2A3|ATP2C2|C3ORF70|CD44|CKAP4|CRYBG1|EFNB2|EGLN3|EPHA4|FAM46A|FAM114A1|FNIP2|FOXP1|GATA6|GPR37|GSTA1|HDLBP|JAG1|KCTD15|KDELR3|LCN2|LMNA|MAOA|MIR22HG|MT2A|MTSS1|NAB1|NUCB2|OSR2|PAPSS2|PLEKHB1|PRSS8|RASD1|SEC24D|SGMS1|SIPA1L2|SLC6A8|SLC6A14|SLC37A1|SLC39A8|TACSTD2|TBC1D2|TGFA|TLE1|TMPRSS4|TNFRSF11B|TPK1|VDR
GSE17974_IL4_AND_ANTI_IL12_VS_UNTREATED_6H_ACT_CD4_TCELL_UP	6	CATSPER3|FAM102B|GNA14|PGPEP1|RTN2|UGT2B17	0.000284534181738	31	8.05434319403e-06	ASCL1|ASTN2|C3ORF18|C9ORF84|CAP2|CASQ1|CCDC151|CGA|DACH1|DLG3|EREG|FBXL17|GATA3|HSBP1L1|IGFBP2|IRX5|KIAA1257|KIAA1324L|LINC01116|NLRP5|PARP3|PATJ|PJVK|RAB27B|RAB30|RAD51B|SCGN|TEX9|TPRG1|TSHZ1|ZBTB14	14	0.000561014020282	CAMK2D|DDB2|GNAI1|HPCAL1|KLK8|LRRC66|MAOA|PLA2G2A|RNF125|SCIN|ST6GALNAC1|TLR3|TM4SF1|TTC22
HALLMARK_ESTROGEN_RESPONSE_EARLY	16	ABHD2|ABLIM1|BAG1|CA12|FLNB|KRT8|KRT18|KRT19|MLPH|MUC1|SLC1A1|TFF1|TFF3|TIPARP|TJP3|XBP1	1.12662134155e-08	74	3.38142344453e-36	ABAT|ADCY1|ADCY9|AFF1|ANXA9|AR|AREG|ARL3|ASB13|BCL2|BHLHE40|CANT1|CCND1|CELSR1|CELSR2|CHPT1|CISH|DEPTOR|DHRS2|ELOVL2|ELOVL5|FAM102A|FASN|GFRA1|GREB1|HES1|HSPB8|IGF1R|IL6ST|ITPK1|KCNK15|KDM4B|LRIG1|MAPT|MAST4|MED13L|MREG|MSMB|MYB|NPY1R|NRIP1|OLFM1|P2RY2|PDZK1|PEX11A|PGR|RAB17|RARA|REEP1|RET|RETREG1|RHOD|SCNN1A|SEC14L2|SIAH2|SLC1A4|SLC7A2|SLC9A3R1|SLC19A2|SLC22A5|SLC27A2|SLC39A6|STC2|SULT2B1|SYBU|SYT12|TBC1D30|THSD4|TMEM164|TPBG|TTC39A|UGCG|WFS1|WWC1	15	2.2532426831e-08	AQP3|CBFA2T3|CD44|CLIC3|ENDOD1|FHL2|FRK|KLF4|KLK10|OVOL2|PAPSS2|SLC2A1|SLC37A1|SNX24|TMPRSS3
HALLMARK_ESTROGEN_RESPONSE_LATE	18	ABHD2|AGR2|BAG1|CA12|DNAJC1|DNAJC12|FLNB|KRT19|SERPINA1|SERPINA3|ST6GALNAC2|TFF1|TFF3|TJP3|TSPAN13|UGDH|UNC13B|XBP1	1.97110015413e-10	53	2.13799889333e-21	ACOX2|AFF1|ALDH3A2|ANXA9|AREG|ARL3|ASCL1|BCL2|CACNA2D2|CCND1|CELSR2|CHPT1|CHST8|CISH|COX6C|CYP4F11|DCXR|DHRS2|DLG5|ELOVL5|FAM102A|FGFR3|HMGCS2|HSPB8|IGSF1|IL6ST|ITPK1|LARGE1|MAPT|MYB|NAB2|NPY1R|NRIP1|OLFM1|PDZK1|PGR|PRKAR2B|PRLR|PTGER3|RABEP1|RET|SCNN1A|SCUBE2|SERPINA5|SIAH2|SLC1A4|SLC9A3R1|SLC22A5|SLC27A2|SORD|SULT2B1|TPBG|WFS1	16	3.94220030823e-10	ASS1|CA2|CD44|CLIC3|EMP2|FRK|GJB3|KLF4|KLK10|KLK11|LAMC2|NMU|OVOL2|PAPSS2|TMPRSS3|TRIM29
Human Breast_Abba05_183genes (15762987-SuppTable4)	24	ACADSB|ADIRF|AGR2|C1ORF21|DNAJC12|DUSP4|FLNB|FOXA1|FUT8|KRT18|MUC1|NTN4|RNASE4|SHROOM3|ST6GALNAC2|TFF1|TFF3|TJP3|TRAK1|TSPAN1|TSPAN13|TSPAN15|WFDC2|XBP1	3.83495364986e-07	81	9.15788642754e-58	ABCD3|ADGRB2|AIG1|ALCAM|ANXA9|AR|ASAH1|AZGP1|BCL2|BHLHE40|BMPR1B|BTG2|CACNA2D2|CAMK2N1|CCND1|CELSR2|CHAD|CRIP2|CROT|CYB5R1|CYBRD1|DACH1|DBNDD2|DLG3|EEF1A2|ELP2|ESR1|EVL|FBP1|FGD3|GATA3|GLUL|GPD1L|HMGCL|HSPB1|IL6ST|IRS1|IRX5|ISOC1|KIAA0232|KIF12|LDLRAD4|LRBA|LRIG1|LRP2|MORF4L2|MPP7|MYB|MYO6|NAT1|NPY1R|PIGT|PLAT|PRKAR2B|PRR15L|PTP4A2|PTPRT|QDPR|RARA|REEP6|SCUBE2|SDC4|SEC14L2|SEMA3C|SH3BGRL|SIAH2|SLC9A3R1|SLC39A6|SREBF1|STARD10|STK39|SUSD3|SYTL4|TBC1D9|TCEAL1|TCEAL3|TCEAL4|TPBG|UGCG|VAV3|WWP1	2	7.66990729972e-07	CCNG2|EMP2
Human Breast_Barry10_1022genes (20368555-TS-1)	34	ADCY6|ADIRF|AGR2|ANG|C1ORF21|CA12|CFB|DNAJC12|DRC3|EML2|FLNB|FOXA1|FUT8|GOLGB1|INPP4B|KIAA0040|KRT18|LRP10|MLPH|NECTIN2|P2RX4|RBM47|RNASE4|RTN2|SERPINA3|SLC44A4|SPDEF|SYTL2|TFF1|TFF3|TRAK1|TRIM8|TSPAN13|XBP1	0.000324431156132	206	2.3857455946e-52	ABAT|ABLIM3|ACOT2|ADCY1|ADCY9|ADD1|ADGRB2|AFF3|AKR7A2|AKR7A3|ANXA9|APBB2|ARL3|ARMT1|ASAH1|ASB13|ATXN2|BBOF1|BBS1|BBS4|BCAM|BCL2|BHLHE40|BTG2|C3ORF18|C5ORF30|C9ORF116|CACNA1D|CAP2|CARD10|CCDC170|CCND1|CELSR1|CELSR2|CERS2|CERS6|CFAP69|CHAD|CHRD|CISH|CLBA1|CLSTN2|COL4A5|COQ4|CSAD|CTSF|CYB5A|CYP2B6|DACH1|DALRD3|DBNDD2|DCAF10|DCAF11|DLG5|DNAJC16|DNALI1|DYNC2H1|EFHC1|ELOVL2|ELOVL5|ENPP1|ERBB3|ERBB4|EVA1B|EVL|FAAH|FAM110B|FAM234B|FBP1|FMO5|FRY|GALNT6|GAMT|GATA3|GATAD1|GFRA1|GLI3|GLT8D1|GLUL|GPC1|GPD1L|GREB1|HEXIM1|HHAT|HMGCL|HPN|HSD17B8|HSPB1|IDUA|IFT88|IFT122|IGF1R|IGFBP2|IL6ST|IQCK|IRS1|IRX5|IVD|KAT6B|KCNE4|KCNK15|KDM4B|KIAA0232|KIF16B|LRBA|LRIG1|LZTFL1|MAGED2|MAPT|MAST4|MCCC2|MED13L|MREG|MYB|MZF1|MZT2A|NAT1|NEBL|NEK11|NFATC4|NINJ1|NKAIN1|NME5|NPDC1|NRIP1|P4HTM|PATJ|PDE4A|PDZK1|PEX11A|PGR|PIGT|PLAT|PNPLA4|POLD4|PRKAB1|PRRG2|PTGER3|PTP4A2|PTPRT|QDPR|RAB5B|RAB17|RABEP1|RAI2|RARA|RBKS|RETREG1|RHOB|RHOD|RMND5B|RPH3AL|RUFY1|SALL2|SCCPDH|SCNN1A|SCUBE2|SEC14L2|SELENBP1|SEMA3F|SERINC3|SERPINA5|SH3BGRL|SH3GLB2|SIAH2|SLC7A8|SLC9A3R1|SLC16A5|SLC16A6|SLC19A2|SLC22A5|SLC30A1|SLC39A6|SSH3|STARD13|STC2|STK32B|STX18|SUOX|SYBU|SYNC|SYT17|TBC1D9|TBC1D9B|TBX3|TCEAL1|TCEAL4|TCTN1|TESMIN|THSD4|THTPA|TLE3|TMBIM4|TMBIM6|TPBG|TRPS1|TSPAN31|TTC39A|UGCG|VAV3|VPS39|WDR19|WFS1|WWP1|ZMYND10|ZNF516	29	0.000648862312264	ABHD14A|ARL1|ASS1|ATP1B3|C1ORF106|COG2|CXCL1|EMP2|FOXD1|FUT3|GMDS|IL1R2|ITPR3|LIMA1|MALL|ME1|METRN|MMP7|NMU|PFKP|PKP1|PROM1|RARRES1|RHBDF1|SMCO4|TGFA|TMEM30B|TNFRSF21|TXNDC5
Human Breast_BernardPierrot_74genes (18757432-Table2a)	4	FGFR2|RAP1GAP|SERPINA1|TFF3	0.000471012692662	12	0.000317777820681	ACOT6|CISH|HIP1|IFT122|IL6ST|KIF5C|PRLR|RARA|SPRED2|STC1|STC2|ZNF703	6	0.000624247564643	GPR153|MT1X|PLCE1|RHOF|SYT13|TBC1D2
Human Breast_Charafe-Jauffret06_1233genes (16288205-GeneTable2)	35	ADCY6|AGR2|BCAS1|C9ORF152|CA12|CACFD1|CAPN9|CFB|CREB3L1|CREB3L4|DNAJC1|DOPEY2|EPS8L1|FOXA1|HID1|KIAA0040|KIAA1211|KIAA1324|KRT19|MLPH|RETSAT|RSPH1|SIDT1|SLC2A10|SLC44A4|SMIM14|SPDEF|TC2N|TFF1|TFF3|TJP3|TSPAN13|TSPAN15|VIPR1|XBP1	2.79207617664e-20	148	7.33908591022e-24	ABCD3|ABCG1|ACVR1B|ADGRB2|AFF3|AGAP1|ALDH3A2|ANKRD30A|ANXA9|AR|ARFGEF3|ARFIP2|ARHGEF26|ASB8|ASTN2|BCL2|BCOR|C10ORF82|C17ORF58|CACNA1D|CACNA2D2|CACNB3|CAMSAP3|CAMTA1|CANT1|CCND1|CERS2|CERS6|CISH|CLSTN2|CNNM3|CSRNP2|CTNND2|CTXN1|CXXC5|CYB561|CYBRD1|DACH1|DEGS2|DEPTOR|DLG3|DNALI1|ELOVL2|ENPP1|ERBB3|EREG|ERGIC1|ESR1|ETNK2|EVL|F7|FAM110B|FAM234B|FGFR4|FRS2|GALNT6|GAMT|GATA3|GOLT1A|GPD1L|GPR160|GPRC5C|HECTD4|HMG20B|HMGCS2|HPN|HPX|INPP5J|IVD|JUP|KAT6B|KDM4B|KIAA0232|KIF12|KLHDC9|LARGE1|LFNG|LIN7A|LNX1|LONRF2|LURAP1L|MAGED2|MAPT|MCCC2|MED13L|MEGF9|MGAT4A|MTERF2|MYB|MYO6|NKAIN1|NPDC1|P4HTM|PATZ1|PBX1|PGR|PKP4|PLAT|PLEKHH1|PPP2R2C|PREX1|PRLR|PRRT3|RAB3D|RAB17|RALGPS1|RGL2|RHOB|RND1|RNF103|SCUBE2|SEC16A|SH3GLB2|SHTN1|SLC1A4|SLC4A8|SLC7A8|SLC9A3R1|SLC16A6|SLC25A29|SLC38A1|STARD10|SYNE4|SYNGR2|TADA2B|TAPT1|TBC1D30|TBX3|TESMIN|THSD4|TLE3|TMBIM6|TMEM80|TMEM229B|TMEM268|TNRC18|TRIL|TRIM3|TRPS1|TTC6|TTC9|TTC39A|VPS37C|WDR1|WFS1|ZBTB42|ZNF467|ZNF703	72	5.58341844468e-20	AKR1B10|ANXA2|ANXA2P2|ANXA3|ATP1B3|ATP2C2|BLNK|CASP1|CD44|CDH3|CRYBG1|CXCL1|CXCL2|CXCL3|DGKA|DIRC2|DSG3|ELL2|EMP2|EPHA2|EVA1C|F3|FAS|FOSL1|GJB3|GNAI1|GRAMD4|HIP1R|HK2|HSD17B11|IL18|INPP1|JAG1|KCTD15|KLK10|KRT6A|KRT6B|LAMA3|LAMB3|LAMC2|MIR22HG|MT1F|MT1G|MT1H|MT1M|MT1X|MT2A|NAB1|NT5E|NUCB2|PDZK1IP1|PI3|PLA2G4A|PRSS12|RHBDF1|RNF145|RRAS2|S100A2|S100A10|SERPINB5|SH3GLB1|SIDT2|SLC27A3|SLC35A1|SLC37A1|SLPI|TBL1X|TGFA|TMEM30A|TNFAIP8|TRIM29|ZC3H12C
Human Breast_Charafe-Jauffret06_1309genes (16288205-GeneTable3)	49	ADCY6|ADIRF|AGR2|BCAS1|C9ORF152|CA12|CACFD1|CADPS2|CAPN8|CGN|CNNM4|CREB3L4|DHRS4-AS1|DNAJC1|EPB41L4A|EPS8L1|FAM174B|FAM214A|FOXA1|HID1|KIAA0040|KIAA1324|KRT19|MLPH|MTCL1|MUC1|PLEKHA6|PRODH|RBM47|RSPH1|S100A14|S100P|SIDT1|SPDEF|SPINT1|ST6GALNAC2|SYTL1|TC2N|TFF1|TFF3|TJP3|TMC4|TMEM45B|TRPM4|TSPAN1|TSPAN13|VIPR1|XBP1|ZG16B	1.32669774425e-16	150	6.12826257016e-26	ABAT|ABCA12|ABCC11|ABCG1|ACVR1B|AK5|ALDH3B2|ALDH4A1|ANKRD30A|ANXA9|AP1M2|ARFGEF3|ARFIP2|ARRDC1|ASB8|AZGP1|BICDL1|C11ORF52|CACNA1D|CACNB3|CAMK2N1|CAMSAP3|CDS1|CEACAM6|CERS6|COMMD3|CRABP2|CRIP2|CRNDE|CSAD|CTNND2|CXORF40B|CYB5A|CYB561|CYP4B1|DCAF11|DEGS2|DLG3|DOK7|DUSP16|EFHD1|EHF|ENPP5|EPB41L5|ERBB3|ESR1|FAAH|FAM102A|FBP1|FGD3|FXYD3|GALNT6|GATA3|GGT6|GOLT1A|GPD1L|GPR160|H2AFJ|IGFBP2|INPP5J|IRX5|ITPK1|JUP|KIAA1211L|LMTK3|LNX1|LYPD3|MARVELD2|MCCC2|MEGF9|MGAT4A|MGMT|MIR29B2|MKNK2|MMEL1|MPP7|MREG|MRFAP1L1|MSX2|MYB|MYO6|NEBL|NPDC1|OVOL1|P4HTM|PATJ|PATZ1|PDE4A|PER2|PGAP2|PIP4K2C|PLAT|PPDPF|PPM1H|PREX1|PRLR|PROM2|PRR15|PRR15L|RAB3D|RAB5B|RAB17|RAB27B|RALGPS1|RASEF|RERG|RGL2|RHOB|RMND5B|RNF103|SELENBP1|SEMA3F|SLC7A8|SLC9A3R1|SLC16A14|SLC25A29|SORL1|SPOPL|SSH3|STARD10|STRADB|SULT2B1|SUOX|SYNE4|SYNGR2|TADA2B|TBC1D30|TLE3|TMBIM4|TMBIM6|TMED3|TMEM125|TMEM229B|TMEM268|TOX3|TP53TG1|TRIL|TRIM3|TRPS1|TSC22D3|TSTD1|TTC9|TTC39A|TUFT1|VAV3|WFS1|ZBTB7B|ZBTB42|ZNF385A|ZNF467	56	2.65339548788e-16	ANTXR2|ANXA2|ANXA2P2|ARSJ|ATP2C2|BICDL2|BLNK|C4ORF19|C6ORF132|CASP1|CD44|CDH3|CDKN2C|CLN3|CRB3|CRYBG2|CXCL2|DENND2D|EMP2|EPHA2|ETV5|FA2H|FAS|FOSL1|GNAI1|GRAMD4|HIP1R|HSD17B11|INPP1|JAG1|MB|NAB1|NECTIN4|NT5E|OVOL2|PFKP|PGAP3|PICALM|PRSS8|PRSS12|RHBDF1|RNF145|RPS6KA5|S100A2|SERPINB1|SH3GLB1|SLC35A1|SLC37A1|SMAD9|TMEM30B|TMPRSS2|TNK2|TOX|TRNP1|ZC3H12C|ZIC2
Human Breast_Creighton08_584genes (18757322-TableS3)	15	ACADSB|ANG|C1ORF115|CAPN9|FGFR2|GNA14|GOLGB1|GPRC5A|MLPH|RNASE4|RTN2|SLC2A10|ST6GALNAC2|TMEM254|TRIM8	0.000421615768894	86	8.42176714893e-12	ACSS3|ADCY1|AKAP9|ALDH3A2|APBB2|ARHGAP32|ATP7A|ATP8A2|BBOF1|BCL2|BCL6|BDH2|BRD8|C2CD5|CTSF|CYBRD1|DCAF11|DEPTOR|DIO1|DNAAF1|DYNC2H1|DZIP3|EFHD1|ELOVL2|ERBB3|ERBB4|FAM110B|FGF13|FMO5|FRAT1|FRY|FXYD3|FYCO1|GLT8D1|GLUL|HMGCL|IL6ST|IP6K2|IRS1|JHY|KCNMA1|LARGE1|LDLRAD4|LRIG1|MAGED2|MSMB|MYB|NAT1|NEDD4L|NEK11|NME5|NPY1R|NRIP1|PAH|PBX1|PCSK6|PEX11A|PIGV|PKP4|PLCL1|PLK2|POF1B|PSD3|PSD4|PTGER3|PTPN13|RAI2|RALGPS1|RAMP1|REPS2|RETREG1|RNF103|RUFY1|SCUBE2|SELENBP1|SLC1A2|SLC29A3|SLC35D2|SORL1|TBC1D9|TCEAL1|TMEM135|ULK2|VAV3|WDR19|WDR48	26	0.000843231529367	APPL2|AQP3|ATP8A1|BLNK|C4ORF19|CAST|CCNG2|CD55|CLMN|EHHADH|FAM114A1|HSD17B11|INSR|LIMA1|MAOA|MATN2|MT1F|MT1X|NDRG1|PTGER4|SERPINB1|SGMS1|SIDT2|SMPDL3A|TNFRSF11B|TPK1
Human Breast_Creighton08_643genes (18794137-SuppTable1e)	24	ACADSB|AGR2|BCAS1|C1ORF115|CAPN9|CORO2A|CPEB2|DOPEY2|EPB41L4A|GALNT7|HSPA2|MARC2|MUC1|PGPEP1|PLEKHS1|PLLP|PTK6|SMIM14|TC2N|TMEM45B|TRAK1|TSPAN1|TSPAN13|UGDH	3.25124049113e-14	80	6.27733951894e-14	AACS|ABCC5|ALCAM|ALDH3B2|ARFGEF3|ARHGEF37|ASAH1|ATP6V1G1|BCAM|CCDC160|CDS1|CEACAM5|CEACAM6|COBLL1|COL28A1|CRISP3|CTNND2|CXORF40B|DHCR24|ENPP1|ERBB4|FAM110C|FAM129A|FAM198B|FAM234B|FAM241A|FBP1|FGF12|FGF13|GATA2|GDF15|GLCCI1|GPR160|GREB1L|HTR7P1|KCNMA1|LFNG|LIMCH1|LNX1|LRPAP1|LURAP1L|MTA3|NCEH1|NEBL|NOSTRIN|NXPH1|PALM3|PAX9|PBX1|PBX3|PIP4K2C|PLK2|PROM2|PRR15L|PRRT3|PSD3|PTPN13|RAB27B|RAI2|REEP1|RNF103|SASH1|SC5D|SCCPDH|SERHL2|SGSM1|SH3BGRL|SH3BP4|SLC12A2|SPICE1|SPRED2|TBC1D30|TMEM87B|TMEM135|TRIM62|TTC6|TTC9|VPS13B|YIPF1|ZNF827	44	2.25141463318e-15	AHR|ANXA3|AQP3|ARF4|ARFGAP3|ATP2A3|ATP2C2|ATP8A1|BLNK|C3ORF70|CAP1|CD55|CDH3|COPB2|DAG1|EFNB2|EGLN3|ELL2|FAM114A1|FOXP1|GATA6|GRAMD4|HIP1R|IL7|INPP1|KDELR3|KLF3|LIMA1|MB|MGLL|NACC2|NUCB2|PLBD1|RASD1|RHBDF1|RHOA|S100A13|SLC4A11|SLC41A2|SQOR|ST3GAL4|TACSTD2|TMEM50B|TMPRSS2
Human Breast_Creighton08_1024genes (18794137-SuppTable1c)	36	ATP1B1|BCAS1|C2ORF72|CFB|CGN|CIB1|CLDN12|CORO2A|DUSP4|ETFDH|FCGBP|GALNT7|GNA14|GOLGB1|GOLM1|MUC1|NTN4|OSBPL10|PDLIM5|PGPEP1|PLEKHS1|PTK6|QSOX1|S100P|SCGB2A1|STEAP1|STEAP2|STS|TC2N|TCEA3|TMC5|TMEM45B|TRAK1|TSPAN1|VIPR1|WFDC2	2.35057637578e-07	79	4.70115275156e-07	ADRB1|AGAP1|AMIGO1|ARFGEF3|ARHGAP44|ASAH1|ASPH|ATG16L1|ATP7B|BBS4|BPIFB1|CCDC160|CDS1|CEACAM5|CEACAM6|CFAP44|CLGN|CNDP2|COX15|CRISP2|CRISP3|CYB5A|DHCR24|EHF|ENTPD3|FAM110C|FAM129A|FRY|GALNT6|GDF15|GLT8D1|GPC4|GPCPD1|GPR143|HMGCS2|KCNE4|KCNS3|KIAA0232|KLHDC7A|LIMCH1|LRPAP1|LRRC6|LRRC31|MEAF6|MISP|MTHFR|NANS|NCEH1|NKX3-1|PAK6|PAX9|PCSK6|PLIN5|PRKAB1|PRR15|PRRT3|PTPN13|PTPRN2|RBKS|SASH1|SCNN1A|SELENBP1|SH2D4A|SH3RF1|SLC12A2|SLC16A14|SLC27A2|SLC35D2|SLC44A5|STK39|SYT17|TACC2|TBC1D9B|TMBIM6|TMTC2|TOX3|TSHZ1|WDR72|YIPF1	86	6.69613230037e-35	ABCC3|ADGRF1|AHR|AK1|APPL2|ARFGAP3|ARHGAP26|ATP2C2|B3GNT3|B3GNT7|B4GALT4|BACE2|BICDL2|C1ORF106|C1ORF116|C3ORF70|C4BPA|C4ORF19|CAPN2|CAPN5|CASP7|CAST|CD55|CLIC5|CLINT1|CLMN|CRYM|CYP2C18|CYP3A5|DIRC2|DMXL2|ELL2|EPS8L2|ERLEC1|F5|FAM114A1|FUT3|FUT6|GALNT5|GALNT12|GMDS|GNE|GRAMD4|GSTA1|HS3ST1|INPP1|LCN2|LGR4|LIF|LONRF3|LRIG3|LYZ|MALL|MARCH3|MFSD4A|MUC4|MUC13|NAMPT|OLFM4|PAG1|PDE4D|PFKFB2|PGM1|PITPNM3|PLD1|PPL|PTPRH|RAB26|RAB27A|RGP1|RNF145|SERPINB1|SGMS1|SLC2A13|SLC4A11|SLC37A1|SLPI|SMCO4|SRD5A3|ST6GALNAC1|STIM2|TBC1D2|TCN1|TMEM263|TMPRSS2|TRNP1
Human Breast_Creighton09_594genes (18425577-TableS3a)	40	ADIRF|AGR2|BCAS1|C1ORF21|CA12|DNAJC12|DRC3|DUSP4|EML2|FAM174B|FLNB|FOXA1|FUT8|GOLGB1|GPRC5A|HSPA2|INPP4B|KCNJ3|KIAA0040|KRT18|MLPH|NECTIN2|NQO1|RBM47|RNASE4|SIDT1|SLC22A18|SLC44A4|SPDEF|ST6GALNAC2|SYTL2|TFF1|TFF3|TJP3|TMEM254|TNNT1|TRIM8|TSPAN1|TSPAN13|XBP1	6.731393507e-09	233	1.06490606328e-151	ABAT|ABCC8|ABLIM3|ACOX2|ADCY1|ADCY9|AFF3|AKR7A3|ANXA9|APBB2|AREG|ARFIP2|ARL3|ARMT1|ASAH1|ASB13|ATP7B|ATP8A2|B4GAT1|BBOF1|BBS1|BCAM|BCL2|BHLHE40|BRD3OS|BTG2|C5ORF30|C9ORF116|CACNA1D|CACNA2D2|CACNG4|CAMK2N1|CAP2|CARD10|CASC1|CCDC170|CCND1|CELSR1|CERS2|CHAD|CHRD|CISH|CLSTN2|CNNM3|COL4A5|COQ4|COX6C|CPB1|CSAD|CTNND2|CXORF40B|CYB5A|CYB561D2|CYP2B6|CYP4B1|DACH1|DALRD3|DBNDD2|DCAF10|DCAF11|DCAF16|DHCR24|DHRS2|DLG5|DNAAF1|DNAJC16|DNALI1|EEF1A2|EFHC1|ELOVL2|ELOVL5|ENPP1|ERBB4|ESR1|EVL|F7|FAAH|FAM120A|FAM234B|FBP1|FMO5|FRY|GALNT6|GAMT|GATA2|GATA3|GATAD1|GDF15|GEMIN8|GFRA1|GLI3|GLT8D1|GLUL|GOLGA1|GPD1L|GREB1|HEBP1|HEXIM1|HHAT|HMGCL|HPN|HPX|HSD17B8|HSPB8|IDUA|IFT88|IFT122|IGF1R|IGFBP2|IL6ST|INPP5J|IQCK|IRS1|IRX5|IVD|KAT6B|KCND3|KCNE4|KCNK15|KDM4B|KIAA0232|LDLRAD4|LMAN2L|LRBA|LRIG1|LRRC6|LYRM9|LZTFL1|MAGED2|MAPT|MAST4|MCCC2|MEAF6|MED13L|MISP|MREG|MRPS30|MSX2|MYB|MZF1|MZT2A|N4BP3|NAT1|NEBL|NECAB3|NFATC4|NFS1|NINJ1|NKAIN1|NPDC1|NRIP1|OCEL1|P4HTM|PAAF1|PATJ|PCSK6|PDZK1|PEX11A|PHF20|PIGT|PLAT|POLD4|PPP1R3C|PPP1R26|PRKAB1|PRLR|PSD4|PTP4A2|RAB17|RABEP1|RAI2|RALGPS2|RAMP1|RARA|RBKS|REEP1|REPS2|RET|RETREG1|RGL2|RHOB|RMND1|RMND5B|RPH3AL|SALL2|SCCPDH|SCNN1A|SCUBE2|SDC4|SELENBP1|SEMA3F|SERINC3|SERPINA5|SH3D21|SHPK|SIAH2|SLC7A8|SLC9A3R1|SLC16A5|SLC16A6|SLC19A2|SLC22A5|SLC27A2|SLC29A3|SLC39A6|SPEF1|SREBF1|SSH3|STC2|STK32B|SUOX|SYBU|SYT1|TBC1D9|TCEAL4|TCTN1|TESMIN|TLE3|TMBIM4|TMBIM6|TPBG|TSC22D3|TSPAN31|TTC39A|TUFT1|UGCG|VAV3|VPS37C|WDR19|WFS1|WWP1|ZMYND10|ZNF516	13	1.3462787014e-08	ABHD14A|ARL1|BAIAP2|C5ORF15|CBFA2T3|CCNG2|FDXR|IFT140|METRN|OVOL2|PANK3|RAB26|TMEM30B
Human Breast_Desmedt08_469genes_ESR1_Module (18698033-tableS1-ESR1)	30	AGR2|BCAS1|C1ORF21|C3ORF52|CA12|CACFD1|CFB|CIB1|CNNM4|DNAJC1|DNAJC12|FAM174B|FOXA1|FUT8|GALNT7|GPRC5A|HSPA2|KCNJ3|KIAA0040|RBM47|SERPINA3|SERPINB6|SIDT1|SLC22A18|TFF1|TFF3|TJP3|TNNT1|WFDC2|XBP1	1.82613218781e-14	141	3.66774307774e-54	ABAT|ABCC8|ABCD3|ABLIM3|ACOX2|ACOX3|ADIPOR2|AKR7A3|ALCAM|ANXA9|APBB2|APH1B|AREG|ASAH1|ASTN2|BBS1|BCOR|BEX1|C3ORF18|C16ORF45|CACNG1|CAMK2N1|CCNO|CDK20|CERS4|CFAP45|CHAD|CITED1|CLBA1|CLGN|CLUAP1|COX6C|CPB1|CTNND2|CTSF|CYB5R1|CYP2B6|DCXR|DHCR24|DHRS2|DIO1|DNAAF1|DNALI1|DUSP5|DZANK1|EEF1A2|ELOVL2|ELOVL5|ERBB4|ESR1|ETNK2|EVL|F7|FAM102A|FAM234B|FBP1|GALNT6|GATA3|GDF15|GFRA1|GLI3|GLRB|GLS2|GOLGA1|GP2|GPD1L|GRIA2|HDAC11|HEBP1|HEXIM1|HHAT|HSPB1|IER3|IFT88|IL6ST|INPP5J|IRS1|IRX5|JUP|KIAA0753|KIF16B|LDLRAD4|LRBA|LRIG1|LRP2|MAN2B2|MCCC2|MGMT|MISP|MREG|MRPS30|MST1|MSX2|MYB|NAT1|NEDD4L|NME5|NOS1AP|NR2E3|OCEL1|PDZK1|PGR|PIGT|PIGV|PLAT|PRR15L|PTPN13|PTPRT|PVALB|QDPR|RAMP1|RBKS|REPS2|RETREG1|RNF43|RPH3AL|SCCPDH|SCUBE2|SEC14L2|SERPINA5|SLC9A3R1|SLC16A6|SLC22A4|SLC27A2|SLC38A1|SORD|SPR|SREBF1|SSH3|SYBU|TBC1D9|TBX3|TCEAL4|TESMIN|THNSL2|TMEM80|TTC12|TUFT1|ZMYND10|ZNF281|ZNF446	35	3.65226437561e-14	ABHD14A|ART3|B3GNT3|BACE2|C1ORF106|CBFA2T3|CCL20|CLIC3|CRYBG1|CXCL1|CXCL2|EMP2|FDXR|GABRP|GATA6|GNAI1|GPR37|HSD17B2|IL7|JOSD1|MALL|MARK1|NMU|OVOL2|PKP1|PLA2G4A|PROM1|RAB26|SERPINB5|SLC6A14|SYT13|TM4SF1|TNFRSF11A|TPSG1|TRIM29
Human Breast_Doane06_138genes (16491124-Table1)	12	AGR2|C1ORF115|FAM174B|FOXA1|GALNT7|HGD|MLPH|SIDT1|SPDEF|TFF3|TNIK|XBP1	2.13750566233e-05	38	5.37948188738e-23	ABCA12|ABCC6|ALCAM|ALDH3B2|ALDH4A1|AR|AZGP1|C16ORF45|CEACAM6|CERS4|CRAT|CRISP3|CYB5A|CYP4F8|DCXR|DHRS2|FASN|FGFR4|GALNT6|GPD1L|HMGCS2|HPX|KCNMA1|LRIG1|LRRC31|PBLD|PEX11A|PIP|PRLR|RHOB|RND1|SCUBE2|SERHL2|TBC1D9|TFAP2B|TOX3|TRIL|TRIM3	4	4.27501132467e-05	BRINP3|FA2H|MARCH3|SERPINB5
Human Breast_Doane06_145genes (16491124-SuppTable1)	26	ACADSB|ADIRF|AGR2|C1ORF21|CA12|CFB|DNAJC12|DUSP4|EPS8L1|FOXA1|GALNT7|GPRC5A|INPP4B|KIAA1324|KRT18|MLPH|MUC1|SIDT1|SLC44A4|SPDEF|TFF1|TFF3|TJP3|TNNT1|TSPAN1|XBP1	8.41102182395e-12	75	2.18168953314e-92	ABAT|ACOX2|ALCAM|ANXA9|AR|AREG|ARMT1|AZGP1|BCL2|BMPR1B|C9ORF116|CACNA1D|CCDC170|CELSR1|CERS4|CHAD|CLGN|CLSTN2|CYBRD1|CYP2B6|DACH1|DHRS2|DNALI1|EEF1A2|ELOVL2|ERBB4|ESR1|EVL|FBP1|GAMT|GATA3|GDF15|GFRA1|GREB1|IFT122|KCNE4|KCNK15|MAPT|MAST4|MYB|MYO6|NAT1|PBX1|PDZK1|PEX11A|PGR|PIP|PNPLA4|RET|RHOB|RND1|SCCPDH|SCGB1D2|SCGB2A2|SCNN1A|SCUBE2|SELENBP1|SEMA3C|SERPINA5|SLC4A8|SLC7A8|SLC16A6|SLC27A2|SLC39A6|SSH3|STC2|STK32B|SYBU|SYT1|SYT17|TBC1D9|TOX3|TTC39A|UGCG|VAV3	0	1.68220436479e-11	
Human Breast_Farmer05_269genes__basal_apocrine_luminal (15897907-SuppTable5)	14	ABLIM1|ACADSB|BLVRA|CFB|DUSP4|FLNB|INPP4B|MUC1|NQO1|RNASE4|S100P|SERPINA1|TFF3|XBP1	8.5209381059e-06	67	2.82656368945e-20	ABCD3|ACOX2|ACSF2|AKR7A2|ALCAM|ALDH3A2|ANXA9|ATP6V1G1|C16ORF45|CAMK2N1|CCND1|CEACAM6|COX6C|CRABP2|CRAT|CYB5A|CYBRD1|DHRS7B|ESR1|FBP1|FGFR4|FMO5|FXYD3|GATA3|GRIA2|GSTT1|H1F0|HEXIM1|HMGCS2|HSPB8|IGF1R|IGFBP2|IRS1|JUP|KDM4B|LRBA|MAST4|MCCC2|MED13L|MKNK2|MSX2|NAT1|PBX1|PIK3R1|PLAT|PLK2|PNPLA4|PON3|PPM1H|PTPRN2|QDPR|RABEP1|RALGPS1|RHOB|SCNN1A|SCUBE2|SEC16A|SELENBP1|SEMA3C|SIAH2|SLC39A6|TCEAL1|TFAP2B|TMEM268|TRPS1|VAV3|WWP1	16	1.70418762118e-05	AQP3|CA2|CDH3|CXCL1|EFNB2|GABRP|KCNK1|KDELR3|LAMC2|MB|MT1G|MTSS1|PAPSS2|SLPI|TCN1|TRIM29
Human Breast_Huang07_161genes (17332353-Table2)	6	CA12|CREB3L4|DUSP10|HID1|KIAA1324|TFF1	4.93225675892e-05	23	7.03750932812e-05	ABCG1|ARHGAP29|CERS6|CHPT1|CYB561|DEGS2|EPB41L5|GPD1L|GREB1|IGFBP2|IRX5|ISOC1|MAPT|PLEKHH1|PREX1|PRLR|RHOB|SLC1A2|SLC16A6|SLC38A1|STARD10|TRPS1|VPS37C	13	2.82700418972e-05	ANTXR2|CAST|CLN3|ELL2|EMP2|EPHA2|F3|INPP1|JAG1|LAMB3|PGM1|SLC35A1|TNFRSF21
Human Breast_Kapp06_30genes (16965636-Figure5)	5	AGR2|CA12|FAM174B|FOXA1|MLPH	6.96486858098e-05	10	2.72976151676e-09	BCL2|ESR1|GATA3|GFRA1|GPR160|NAT1|PCSK6|PRR15|SCUBE2|THSD4	2	0.000139294641858	EGLN3|PKP1
Human Breast_Laere08_263genes (19010862-TableS1)	21	ACADSB|ADCY6|AGR3|BCAR3|CA12|CPEB2|DNAJC12|EML2|FLNB|KIAA0040|KIAA1324|MLPH|MUC1|RNASE4|SLC44A4|SMIM14|TCEA3|TFAP2A|TFF3|TMC4|ZG16B	1.19285857326e-06	85	4.42745375079e-52	ABAT|ADD1|AFF3|AKR7A3|ANKRD30A|ANXA9|AP1M2|APBB2|ARFGEF3|ARMT1|BBS1|BCL2|BHLHE40|C5ORF30|CAP2|CCDC74A|CCND1|CDS1|CELSR1|CELSR2|CSAD|CTSF|CYB5R1|CYP4X1|DACH1|DNAJC16|DNALI1|EFHC1|ELOVL2|ENPP5|ERBB3|ESR1|FAM110C|FGD3|FSIP1|GATA3|GFRA1|GLI3|GREB1|IFT88|IL6ST|IRS1|IRX5|IVD|KDM4B|KLHDC9|LZTFL1|MARVELD2|MAST4|MYB|NAT1|NEBL|NOSTRIN|NUDT12|P4HTM|PHOSPHO2|POMGNT1|PPP1R3C|PRLR|QDPR|RASEF|REEP1|REEP6|RERG|RETREG1|SCNN1A|SLC7A8|SLC39A6|SPOPL|STC2|SUSD3|SYBU|TAPT1|TBC1D9|TBX3|TCEA2|TCEAL3|THSD4|TMEM125|TRPS1|TTC39A|UCP2|VAV3|WDR19|WFS1	6	2.38571714653e-06	FBXL16|LYZ|OVOL2|RARRES1|SYT13|TMEM30B
Human Breast_Lien07_213genes (17603561-STable1)	20	ADIRF|AGR2|AGR3|CA12|CREB3L4|DNAJC12|EPN3|FAM214A|FOXA1|HID1|KIAA1324|KRT18|KRT19|PLEKHA6|RSPH1|SCGB2A1|SPDEF|TFF3|XBP1|ZG16B	2.45822645319e-09	51	3.07756539563e-23	ABAT|ABCC11|ACOT4|ACOX2|AP1M2|AR|ARSD|AZGP1|BPIFB1|C11ORF52|CCDC125|CEACAM6|COX6C|CST6|CYP4Z1|DACH1|DHCR24|DNALI1|DYNLRB2|EFHD1|ESR1|FSIP1|FXYD3|GATA3|HCAR1|KLHDC9|MANEAL|MMEL1|MYB|NAT1|NME5|NPDC1|P2RY2|PIP|PRR15L|PTGER3|REEP6|RET|RTN4RL1|SCGB1D1|SCGB1D2|SCGB2A2|SLC9A3R1|SLC25A4|TBC1D9|TESMIN|TMEM25|TMEM125|TRPS1|TTC39A|VAV3	11	4.91645290638e-09	BMP2|CRB3|FBXL16|FOXD1|FRZB|GNAI1|IL1R2|MB|OVOL2|PLA2G4A|TNFRSF11B
Human Breast_Loi10_278genes (20479250-TableS4)	13	ATP1B1|CFB|DOPEY2|FGFR2|GALNT7|GNA14|GOLM1|IQGAP2|MUC1|QSOX1|SERPINA3|TFAP2A|TNIK	1.9884585546e-06	44	3.23353192616e-10	AR|ARNT2|BCL2|CAP2|CEACAM5|CEACAM6|CGA|CRAT|CTNND2|DACH1|EHF|ENPP4|ENTPD3|ESR1|EVL|FAM129A|GAD1|GLRB|GPC4|HMGCS2|LEF1|LIMCH1|MSX2|NAT1|NKX3-1|PFKM|PIK3R1|PLAT|PSD3|PYCARD|RAMP1|REEP1|REPS2|RET|SASH1|SCGB1D2|SCGB2A2|SH3BP4|SORL1|SPAG16|TCIM|TNFSF10|TOX3|UCP2	16	3.976593756e-06	CAPN2|CASP1|CLMN|CRYBG1|GMDS|HPGD|KDELR3|KLF4|MT1E|PDZK1IP1|PLA2G2A|RRAS2|SLC17A5|TACSTD2|TLE1|TMPRSS3
Human Breast_Muggerud06_27genes_LuminalvNonLuminal (16536878-SuppTable4)	3	ACADSB|FOXA1|TFF3	7.44575600353e-05	6	9.54005349651e-05	ESR1|FBP1|GATA3|IGFBP2|NAT1|TCEAL1	4	5.35145851055e-05	CDH3|GABRP|SLPI|TRIM29
Human Breast_O'Brien07_Top100GoodPrognosisGenes (17205517-Top100GoodPrognosisGenes)	16	ACADSB|AGR2|AGR3|CFB|DUSP4|FOXA1|HSPA2|KRT18|SERPINA3|SLC1A1|SLITRK6|TFF1|TFF3|TMC5|XBP1|ZG16B	1.27408157317e-07	47	2.28262628055e-42	AFF3|AKR7A3|AZGP1|CCDC74B|CHPT1|CLIC6|CLSTN2|DHRS2|DNALI1|ERBB4|ESR1|FBP1|FLT3|GALNT6|GATA3|GFRA1|INPP5J|LYPD6|MSX2|MYB|NAT1|NPY1R|PCSK6|PDZK1|PGR|PHYHD1|PIEZO2|PRR15|PTGER3|RAB27B|RBM24|REEP6|SCGB1D2|SCGB2A2|SCUBE2|SEC14L2|SLC7A2|SLC27A2|SUSD3|SYNPO2L|TBC1D9|TBX3|TCIM|THSD4|TPRG1|TRH|ZNF385B	2	2.54816314634e-07	TCN1|TPSG1
Human Breast_Parker09_161genes_IntrinsicGenes_RTPCR (19204204-SupplementaryTable4)	20	AGR2|BAG1|BLVRA|CA12|DNAJC12|EPN3|FAM214A|FOXA1|GALNT7|INPP4B|KIAA1324|KRT8|KRT18|KRT19|MLPH|NTN4|SPDEF|TMEM45B|TSPAN13|XBP1	3.4546874553e-07	38	2.75007180342e-21	ACOT4|AR|BCL2|C16ORF45|CAMK2N1|CAPN13|CCND1|CDKN1B|CELSR1|COX6C|CXXC5|DNALI1|ELOVL5|ESR1|FBP1|FGFR4|GATA3|GPR160|HEXIM1|IGFBP2|LRIG1|MAPT|MDM2|MYB|NAT1|PGR|PIP|RABEP1|RARA|REEP6|SCUBE2|SEMA3C|SLC9A3R1|SLC39A6|SLC40A1|TCEAL1|TMEM25|VAV3	3	6.9093749106e-07	ABCC3|CDH3|KRT17
Human Breast_Parker09_412genes_IntrinsicGenes_Perou2000 (19204204-SupplementaryTable2)	22	ABLIM1|ACADSB|ANG|CFB|DUSP4|FCGBP|FGFR2|FOXA1|INPP4B|KRT8|KRT8P12|MUC1|NQO1|PKIB|RAP1GAP|S100P|SERPINA3|TCEA3|TFF1|TFF3|WFDC2|XBP1	5.77868817319e-09	72	1.02398653772e-15	ACOX2|AFF3|AGL|AKR7A2|ALCAM|ALDH3A2|ANKRD50|ANXA9|ARNT2|ATP7B|BCAM|BCL2|BMP4|BTG2|C16ORF45|CAMK2N1|CCND1|CEACAM5|CELSR2|COX6C|CRABP2|CRAT|CYB5A|DIO1|ESR1|FAAH|FAH|FASN|FMO5|GAD1|GATA3|GFRA1|GJB1|GPR160|GSTT1|HPN|HSPB8|IGFBP2|IRS1|JUP|LRIG1|MAPK8IP2|MARC1|MAST4|MYO6|NAT1|NEBL|NEDD4L|NFIA|NPNT|OLFM1|PBX1|PIK3R1|PLAT|PLK2|PON3|PRLR|PVALB|RALGPS2|REPS2|SCUBE2|SELENBP1|SEMA3C|SHC2|SIAH2|SLC39A6|SLC40A1|STC1|SYT17|TFAP2B|TRPS1|VAV3	25	1.15573753224e-08	ALDH1A1|AQP3|ATP8A1|CA2|CDH3|CKMT1B|COL17A1|CXCL1|EGLN3|GSTA4|KCNK1|KDELR3|KLF4|KRT6A|KRT17|LAMA3|MAOA|MGLL|MMP15|MT1X|MTSS1|PCDHA6|SLPI|TM4SF1|TRIM29
Human Breast_Parker09_498genes_IntrinsicGenes_Perreard2006 (19204204-SupplementaryTable3)	26	ABLIM1|ACADSB|ANG|BLVRA|CFB|DUSP4|FAM214A|FLNB|FOXA1|FOXA3|INPP4B|LIPH|MUC1|NFKBIZ|NQO1|S100P|SHROOM3|ST6GALNAC2|STEAP2|TCEA3|TFF1|TFF3|TMEM45B|UGT2B15|WFDC2|XBP1	2.14977330396e-08	74	1.03753199496e-13	ABCD3|ACOX2|AKR7A2|ALCAM|ALDH3A2|ANXA9|ARHGAP35|ASAH1|ATP6V1G1|BCAM|BMP4|C16ORF45|CAMK2N1|CCND1|CEACAM5|COX6C|CRABP2|CRAT|CTDSPL|CYB5A|CYBRD1|ESR1|FGFR4|FMO5|FXYD3|GATA3|GRIA2|GSTT1|H1F0|HMGCS2|HSPB8|IGFBP2|IRS1|KLHL42|LMAN2L|LRBA|MAST4|MGST2|MKNK2|MST1|MSX2|NAT1|NPNT|NPY1R|NUMA1|PBX1|PIK3R1|PLAT|PLK2|PON3|PPM1H|PTPRN2|PTPRT|QDPR|RABEP1|RALGPS1|RALGPS2|REPS2|RERG|RGL2|SCNN1A|SELENBP1|SEMA3C|SHC2|SIAH2|SLC39A6|SLC40A1|TCEAL1|TFAP2B|TLE3|TMEM268|TRPS1|WWP1|ZNF516	25	4.29953623261e-08	APPL2|AQP3|CA2|CDH3|CKMT1B|CXCL1|DOK4|EFNB2|FKBP11|GABRP|GSTA4|KCNK1|KCTD15|KDELR3|KRT6A|KRT17|MB|MMP15|MTSS1|PAPSS2|PCSK1|S100A10|SLPI|TCN1|TRIM29
Human Breast_Parker09_500genes_IntrinsicGenes_SorlieAnnot (19204204-SupplementaryTable9)	21	ABLIM1|ACADSB|ANG|BLVRA|CFB|DUSP4|FAM214A|FLNB|FOXA1|FOXA3|INPP4B|LIPH|MUC1|NFKBIZ|NQO1|S100P|SHROOM3|STEAP2|TCEA3|TFF3|XBP1	1.24903228525e-07	87	4.3322330528e-16	ABCD3|ACOX2|ACSF2|AKR7A2|ALCAM|ALDH3A2|APBB2|APH1B|ARHGAP35|ASAH1|ATP6V1G1|BCAM|BMP4|C16ORF45|CAMK2N1|CCND1|CEACAM6|CFAP69|CNTD1|COX6C|CRAT|CYB5A|DHRS7B|DUSP16|ENPP5|ESR1|FBP1|FGFR4|FMO5|FXYD3|GATA3|GRIA2|GSTT1|H1F0|HEXIM1|HMGCS2|HSPB8|IGF1R|IGFBP2|IPPK|IRS1|ITPRIPL2|KDM4B|KLHL42|LMAN2L|LRBA|MAST4|MCCC2|MEAF6|MED13L|MGST2|MKNK2|MST1|MSX2|NAT1|NPNT|NPY1R|PIK3R1|PLAT|PLK2|PNPLA4|PON3|PPM1H|PTP4A2|PTPRN2|QDPR|RABEP1|RALGPS1|REPS2|RERG|RGL2|SCNN1A|SCUBE2|SEC16A|SELENBP1|SEMA3C|SHC2|SIAH2|SLC39A6|SLC40A1|TCEAL1|TFAP2B|TLE3|TMEM268|TRPS1|VAV3|WWP1	29	2.49806456617e-07	ACSS2|APPL2|AQP3|CA2|CDH3|CXCL1|EFNB2|FKBP11|GABRP|GSTA4|KCNK1|KCTD15|KDELR3|KRT17|LAMC2|MB|MBOAT2|MMP15|MT1G|MT1X|MTSS1|PAPSS2|PCSK1|PCSK7|S100A10|SLPI|ST3GAL4|TCN1|TRIM29
Human Breast_Parker09_501genes_IntrinsicGenes_Sorlie2003 (19204204-SupplementaryTable6)	21	ABLIM1|ACADSB|ANG|BLVRA|CFB|DUSP4|FAM214A|FLNB|FOXA1|FOXA3|INPP4B|LIPH|MUC1|NFKBIZ|NQO1|S100P|SHROOM3|STEAP2|TCEA3|TFF3|XBP1	5.08303139517e-08	82	6.65747632152e-15	ABCD3|ACOX2|AKR7A2|ALCAM|ALDH3A2|ANXA9|APH1B|ARHGAP35|ASAH1|ATP6V1G1|BCAM|BMP4|C16ORF45|CAMK2N1|CCND1|CEACAM5|COX6C|CRABP2|CRAT|CYB5A|CYBRD1|DHRS7B|ENPP5|ESR1|FBP1|FGFR4|FMO5|FXYD3|GATA3|GRIA2|GSTT1|H1F0|HEXIM1|HMGCS2|HSPB8|IGFBP2|IPPK|IRS1|KLHL42|LMAN2L|LRBA|MAST4|MCCC2|MGST2|MKNK2|MST1|MSX2|NAT1|NPNT|NPY1R|NUMA1|PBX1|PIK3R1|PLAT|PLK2|PNPLA4|PON3|PPM1H|PTPRN2|QDPR|RABEP1|RALGPS1|RALGPS2|REPS2|RERG|RGL2|SCNN1A|SCUBE2|SELENBP1|SEMA3C|SHC2|SIAH2|SLC39A6|SLC40A1|TCEAL1|TFAP2B|TLE3|TMEM268|TRPS1|VAV3|WWP1|ZNF516	29	1.01660621246e-07	ACSS2|APPL2|AQP3|CA2|CDH3|CKMT1B|CXCL1|DOK4|EFNB2|FKBP11|GABRP|GSTA4|KCNK1|KCTD15|KDELR3|KRT6A|KRT17|MB|MBOAT2|MMP15|MT1X|MTSS1|PAPSS2|PCSK1|S100A10|SLPI|ST3GAL4|TCN1|TRIM29
Human Breast_Rouzier05_298genes_4classes (16115903-TableS1)	29	ACADSB|ADIRF|AGR2|BLVRA|CA12|CADPS2|DNAJC12|ECI2|FLNB|FOXA1|FUT8|GALNT7|GPRC5A|KIAA1324|KRT8|KRT18|MLPH|MUC1|NQO1|S100P|SLC2A10|SLC44A4|SPDEF|TFF1|TFF3|TSPAN1|TSPAN13|UGDH|XBP1	1.03934550587e-15	110	4.6163229483e-61	ABAT|ADCY1|ADCY9|AKR7A3|ALCAM|ANXA9|APBB2|AR|ARMT1|ASAH1|BCAM|BCL2|BHLHE40|C5ORF30|C16ORF45|CAMK2N1|CANT1|CEACAM5|CEACAM6|CELSR1|CELSR2|CERS6|CLGN|COX6C|CPB1|CRIP2|CSAD|CYB5A|CYB5R1|CYB561|CYP2B6|DACH1|DBNDD2|DCXR|DNALI1|EEF1A2|ELOVL2|ELOVL5|ENPP1|ERBB3|ERBB4|ESR1|EVL|FAM198B|FBP1|FGFR3|FXYD3|GALNT6|GATA3|GDF15|GFRA1|GLUL|GREB1|HEBP1|HSPB1|IGF1R|IL6ST|IRS1|JUP|KAT6B|KCNK15|KIF16B|LRIG1|MAGED2|MAPT|MCCC2|MED13L|MREG|MRPS30|MYB|NAT1|NPDC1|NPY1R|NRIP1|PBX1|PDZK1|PTP4A2|REEP1|RETREG1|RHOB|SCCPDH|SCNN1A|SCUBE2|SEC14L2|SEMA3C|SEMA3F|SERHL2|SERPINA5|SH3BP4|SH3GLB2|SIAH2|SLC1A4|SLC16A6|SLC19A2|SLC39A6|SREBF1|STC2|SYBU|SYT1|TBC1D9|TCEAL1|TESMIN|TMBIM6|TOX3|TPBG|TSC22D3|TTC39A|UGCG|VAV3|WWP1	22	2.07869101173e-15	AQP3|ART3|ASS1|C1ORF106|CDH3|CTNNA1|GABRP|HPGD|IFT140|KRT6B|METRN|MMP7|PANK3|PFKP|PGAP3|PLA2G4A|PROM1|RARRES1|SERPINB5|SLC6A14|SMCO4|TM4SF1
Human Breast_Schuetz06_101genes (16707453-SuppTable3)	11	ACADSB|CADPS2|DNAJC12|EPN3|GALNT7|KIAA0040|KIAA1324|MLPH|SERPINA1|TJP3|XBP1	3.03529817247e-07	29	1.41698581447e-20	ABAT|ABCD3|ALDH3B2|ANXA9|AREG|CELSR1|CELSR2|ERBB3|ERBB4|FAM234B|FGFR3|GDF15|ISOC1|LRBA|MAGED2|MAST4|MRPS30|MYB|MYO6|PLK2|PRKAR2B|SCNN1A|SLC1A4|SLC19A2|SLC27A2|STC2|TBX3|VAV3|WFS1	5	6.07059634493e-07	IER5|LAMA3|PDZK1IP1|PROM1|TM4SF1
Human Breast_Smid06_87genes_BoneMets (16636340-Table2)	9	AGR2|BCAS1|DUSP4|MLPH|SLC1A1|SLC44A4|TFF1|TFF3|TSPAN1	2.29485141635e-06	21	2.14364705392e-11	ALCAM|ANXA9|C9ORF116|CCNO|CEACAM6|CLGN|CYP2B6|DNALI1|FGFR3|HMGCS2|HPX|KIF5C|LRRC31|MAST4|MSMB|NAT1|REPS2|RND1|SCGB2A2|SCUBE2|TOX3	6	4.58968139623e-06	KLK7|KRT6A|MALL|RARRES1|SERPINB5|TRAF3IP2
Human Breast_Sorlie03_552genes_IntrinsicGeneList (12829800-IntrinsicList)	20	ABLIM1|ACADSB|ANG|BLVRA|CFB|DUSP4|FAM214A|FLNB|FOXA1|FOXA3|INPP4B|LIPH|MUC1|NQO1|S100P|SHROOM3|STEAP2|TCEA3|TFF3|XBP1	1.62599961834e-06	91	2.36515603881e-17	ABCD3|ACOX2|ACSF2|AKR7A2|ALCAM|ALDH3A2|ANXA9|APBB2|APH1B|ARHGAP35|ASAH1|ATP6V1G1|BCAM|BMP4|C16ORF45|CAMK2N1|CCND1|CEACAM6|CFAP69|CNTD1|COX6C|CRABP2|CRAT|CYB5A|CYBRD1|DHRS7B|DUSP16|ENPP5|ESR1|FAM198B|FBP1|FGFR4|FMO5|FXYD3|GATA3|GRIA2|GSTT1|H1F0|HEXIM1|HMGCS2|HSPB8|IGFBP2|IPPK|IRS1|ITPRIPL2|KDM4B|KLHL42|LMAN2L|LRBA|MAST4|MCCC2|MEAF6|MED13L|MGST2|MKNK2|MST1|MSX2|NAT1|NPNT|NPY1R|NUMA1|PBX1|PIK3R1|PLAT|PLK2|PNPLA4|PON3|PPM1H|PTPRN2|QDPR|RABEP1|RALGPS1|RALGPS2|REPS2|RERG|RGL2|SCNN1A|SCUBE2|SEC16A|SELENBP1|SEMA3C|SHC2|SIAH2|SLC39A6|SLC40A1|TCEAL1|TFAP2B|TLE3|TMEM268|TRPS1|VAV3	27	3.25199923665e-06	ACSS2|APPL2|AQP3|CA2|CDH3|CXCL1|EFNB2|FKBP11|GABRP|GSTA4|KCNK1|KCTD15|KDELR3|KRT17|MB|MBOAT2|MMP15|MT1X|MTSS1|PAPSS2|PCSK1|PCSK7|S100A10|SLPI|ST3GAL4|TCN1|TRIM29
Human Breast_Sorlie06_54genes_Luminal_v_Basal (16729877-GeneTable)	5	AGR2|CREB3L4|DNAJC12|MLPH|TFF3	9.84665083608e-07	15	1.92892637586e-07	ABAT|C5ORF30|CYB5A|DNALI1|DYNLRB2|FBP1|FMO5|MSX2|NOSTRIN|NPNT|REEP1|SLC27A2|SLC39A6|STK32B|SUSD3	8	1.77643752963e-06	AIF1L|ART3|C1ORF106|GABRP|LEMD1|PLCE1|PROM1|SLPI
Human Breast_Sotiriou03_606genes_ER (12917485-Table6)	13	ACADSB|ADIRF|FLNB|FUT8|GOLGB1|HOXD1|MUC1|QSOX1|SHROOM3|ST6GALNAC2|TFF3|WFDC2|XBP1	0.000495264721632	60	0.000174860368579	ABCD3|AHCYL1|AIG1|ASAH1|BBOF1|BCAT2|BCL2|BHLHE40|BTG2|CACNA2D2|CEACAM5|CFAP69|CNTD1|CYP4B1|DNAAF1|DUSP5|ELP2|ENPP1|ESR1|FRY|GAMT|GATA3|GLT8D1|GPD1L|HMGCL|HPN|IFT46|IL6ST|IRS1|KIAA0232|LDLRAD4|LRBA|MGST2|MORF4L2|MPP7|MYB|MYO6|NFATC4|NPY1R|NUMA1|PIGT|PTP4A2|PTPRT|RABEP1|RALGPS2|RET|RHOB|RNF103|SDC4|SEMA3C|SIAH2|SLC9A3R1|SLC39A6|SNAPC2|SRARP|STARD10|STK39|UCP2|WDR31|WWP1	26	0.000815669074686	ATP1B3|CCNG2|COG2|CTNNA1|CXCL1|EMP2|FAS|GABRP|GATA6|HS3ST1|IL7|ISL1|KRT6B|LYZ|ME1|MMP7|MST1R|MT1H|MT1X|PAG1|PFKP|POPDC2|PROM1|PTPRR|TNK2|TRIM29
Human Breast_Vincent-Salomon08_1001genes (18381933-SuppTableS4)	26	ABLIM1|ADCY6|ADIRF|BAG1|C1ORF21|CA12|CNNM4|DNAJC12|FGFR2|FLNB|FUT8|KIAA0040|KIAA1324|MLPH|NECTIN2|P2RX4|PDLIM5|RETSAT|RTN2|SERPINA3|SLC22A18|STS|TFAP2A|TRAK1|WFDC2|XBP1	4.65764094301e-06	180	5.94251989625e-37	ABAT|ABCD3|ABCG1|ADCY1|ADCY9|ADGRL1|AGL|AHCYL1|AKR7A2|AKR7A3|ANXA9|APBB2|ARL3|ARMT1|ASAH1|ASB13|ASMTL|ATP9B|B4GAT1|BBOF1|BBS1|BCAM|BCAT2|BCL2|BHLHE40|BMPR1B|BRD3OS|BRD8|BTG2|C2CD5|C3ORF18|CACNA2D2|CAP2|CARD10|CDKN1B|CEACAM5|CELSR1|CELSR2|CERS2|CFAP69|CHPT1|CHRD|CLSTN2|CLUAP1|COX6C|CPB1|CSAD|CTSF|CYB5R1|CYP2B6|DACH1|DBNDD2|DCAF10|DIXDC1|DNAJC16|DNALI1|DNMBP|DZANK1|EEF1A2|EFHC1|ELOVL2|ERBB4|ESR1|EVL|FAAH|FAM110B|FAM193A|FAM234B|FBP1|FBXL2|FBXO2|FBXO9|FBXW4|FRAT1|FRY|GATA3|GATAD1|GIGYF2|GLI3|GLT8D1|GLUL|GPHN|GREB1|H2AFJ|HEBP1|HEXIM1|HMGCL|IDUA|IGF1R|IL6ST|INPP5J|IRS1|ITPR2|KAT6B|KCND3|KCNE4|KDM4B|KIF5C|L3MBTL1|LMAN2L|LONP2|LRBA|LRP2|LRRC6|LZTFL1|MADD|MAPT|MAST4|MED13L|MRNIP|MRPS30|MST1|MST1L|MYB|MZF1|NAB2|NAPA|NAT1|NECAB3|NEDD4L|NOS1AP|NRIP1|NRIP3|NUMA1|P4HTM|PAN2|PBX1|PCSK6|PDZK1|PER2|PFKM|PIEZO2|PIGT|PKP4|PLAT|PPIP5K1|PPP1R3C|PTP4A2|PTPN13|PXMP4|RABEP1|RET|RGL2|RMND5B|RRNAD1|SCUBE2|SDC4|SELENBP1|SEMA3F|SERPINA5|SIAH2|SLC16A4|SLC39A6|SPR|SRR|STARD13|STC2|STK32B|SUOX|SYBU|SYT17|TBC1D9|TBX3|TCEA2|TCEAL1|TCEAL4|TCTN1|TESMIN|TLE3|TM7SF3|TMBIM4|TMEM80|TPBG|TRPS1|TSPAN31|VPS39|WDFY3|WDR19|WFS1|WWP1	42	9.31528188602e-06	ABHD14A|ARL1|ATP1B3|C1ORF106|C5ORF15|CAP1|CCNG2|CHMP5|CKAP4|CRELD1|FA2H|FOXP1|FUT3|GABRP|GCH1|GLYR1|IFT140|LDLR|MAGI1|MAOA|MATN2|MT1E|MT1F|NUCB2|OVOL2|PGAP3|PLEKHB1|S100A10|S100A13|SIDT2|SLC6A14|SLC37A1|SMARCA2|SMCO4|TBL1X|TLE1|TMPRSS3|TNFAIP8|TNK2|TRIOBP|TXNDC5|ZDHHC3
Human Breast_West01_100genes (11562467-Table3)	10	CRIP1|INPP4B|KRT8|KRT18|P2RX4|SERPINA3|SERPINB6|TFF1|TFF3|XBP1	4.7475314082e-06	24	1.38594834607e-15	AR|BCL2|BTG2|COX6C|CPB1|ESR1|FBP1|GATA3|GLUL|HPN|HSPB1|IDUA|IGFBP2|MAPT|MEIS3|MYB|NAT1|NPY1R|NUMA1|POLD4|PTP4A2|TCEAL1|UGCG|WWP1	4	9.49506281502e-06	EMP2|RARRES1|SERPINB5|SLPI
Human Breast_Wirapati08_288genes_ESR1_Module (18662380-S3-ESR1)	26	ACADSB|ADIRF|AGR2|AGR3|CA12|CPEB2|DNAJC12|FAM174B|FAM214A|FOXA1|FUT8|INPP4B|KIAA0040|KRT18|MLPH|NECTIN2|RBM47|SLC22A18|SPDEF|TFF1|TFF3|TJP3|TMC4|TSPAN1|TSPAN13|XBP1	7.62388078805e-10	127	2.5503240956e-74	ABAT|ADCY9|AFF3|AKR7A3|ANXA9|APBB2|AR|ARL3|ARMT1|BCAS4|BCL2|C5ORF30|C9ORF116|CACNA2D2|CCDC96|CCDC170|CCND1|CELSR1|CELSR2|CERS2|CHAD|CISH|CLSTN2|COX6C|CSAD|CXXC5|CYB5R1|CYP2B6|DACH1|DCAF10|DNALI1|EEF1A2|EFHC1|ELOVL2|ERBB3|ERBB4|ESR1|EVA1B|EVL|FAAH|FAM234B|FBP1|GAMT|GATA3|GFRA1|GPD1L|GREB1|HHAT|HMGCL|HPN|IFT88|IGF1R|IL6ST|INPP5J|IRS1|IRX5|KCNK15|KCTD6|KDM4B|KIAA0232|LONRF2|LRBA|LRRC6|MAGED2|MAPT|MCCC2|MED13L|MISP|MREG|MYB|NAT1|NECAB3|NKAIN1|NME5|NPDC1|P4HTM|PARD6B|PDZK1|PIGT|PREX1|PRR15|PTP4A2|QDPR|RAB17|RABEP1|RALGPS1|RARA|RBKS|REPS2|RERG|RETREG1|RHOB|RMND1|RMND5B|RNF103|SALL2|SCCPDH|SCNN1A|SCUBE2|SERPINA5|SIAH2|SLC9A3R1|SLC16A6|SLC19A2|SLC22A5|SLC27A2|SLC39A6|SSH3|STARD10|STC2|SUSD3|SYBU|TBC1D9|TCEAL1|TCEAL4|TCTN1|TESMIN|THSD4|TMBIM4|TMBIM6|TPBG|TPRG1|UGCG|VAV3|WFS1|WWP1|ZMYND10	15	1.52477615761e-09	ASS1|CDH3|COG2|CXCL1|GABRP|MALL|PFKP|PROM1|RAB26|RARRES1|RNF145|SLPI|SMCO4|TMEM30B|TRIM29
Human Breast_Yau07_103genes (17850661-TableS4)	4	FCGBP|GPRC5A|SERPINA1|STEAP1	0.000189258963865	24	6.69458625757e-10	ADCY1|ASAH1|BCL6|CHPT1|CLSTN2|CRAT|GATM|GGTLC1|KCNMA1|LRIG1|MAPT|MSMB|NAT1|PBX3|PGR|PIP|PSD3|PTPRT|SCGB1D2|SCGB2A2|SCUBE2|SERPINA6|SYT1|TRPS1	8	0.000378517258272	ALDH1A1|ATP2A3|CBFA2T3|CD44|CXCL2|KCNK1|MATN2|TSPAN8
Human Breast_Yau07_145genes (17850661-TableS3)	8	ANG|C1ORF115|FLRT3|IQGAP2|RNASE4|S100A14|SCGB2A1|SERPINA1	5.56616355993e-07	38	7.85684591269e-15	ALDH3B2|AREG|ARNT2|CCDC170|CELSR2|COBLL1|COL4A6|CYB5A|DACH1|DCAF10|ENTPD3|ESR1|ESRRG|FAM234B|FASN|GAD1|GATM|GPC4|GREB1|HMGCS2|JUP|LEF1|LIMCH1|LRP2|MSMB|RAI2|REEP1|RETREG1|SASH1|SC5D|SCGB1D2|SCGB2A2|SERPINA5|SERPINA6|SLC25A12|SYNC|TNFSF10|WWOX	13	1.11323270413e-06	CDH3|CLMN|HPGD|LAMA3|LAMB3|LAMC2|LCN2|PRSS2|S100A2|SERPINB5|SOD3|TCN1|TRIM29
Human Colon_Dessein10_744genes (20460542-SuppTable1)	33	ABLIM1|ACADSB|AGR3|ANG|ATP1B1|BCAS1|BLVRA|CAPN9|DQX1|ECI2|FAM83E|FCGBP|FGFR2|GOLGB1|HGD|LIPH|MARC2|MLPH|MUC1|NUDT16|PGPEP1|PKIB|PLEKHA6|PRODH|RNASE4|RSPH1|SDR16C5|SYTL2|TCEA3|TMC5|TNNI3|TNNT1|TP53INP1	8.01477131278e-10	89	1.60295426255e-09	ABCA2|ABCC5|ABCC8|ADAMTS13|ADAMTSL5|ADGRL1|AFF1|AGT|AREG|ARHGEF37|ARSD|ASTE1|ASTN2|ATP7B|BBS5|BCOR|BTG2|CACNB3|CAPN13|CCDC24|CCDC191|CDRT4|CELSR2|CEP126|CHRD|CNTNAP2|CYP2B6|D2HGDH|DEPTOR|DGKD|DLG5|DZIP3|EEF1A2|ENPP5|EVL|FGFR3|GALNT6|GAMT|GGT6|GPC1|GPC4|HHAT|HIVEP3|HMGCS2|IGFBP2|KAT6B|KLHDC9|L3MBTL1|LONRF2|LRRC23|LRRC27|MAMDC4|MARC1|MEGF9|MELTF-AS1|MRPL43|MST1|NOSTRIN|NOXA1|NPDC1|NPHP1|PCSK4|PDE4A|PDZK1|PLIN5|PON2|PROM2|PRRT2|PSD3|REEP6|REPS2|RNF44|SEC16A|SELENBP1|SHTN1|SLC12A2|SNX25|SPEF2|TACC2|TCEAL4|TCTN1|TOX3|TP53I11|TPRG1|TRAF3IP1|TRERF1|UNC5CL|USP54|ZNF91	64	5.30706009068e-21	ABCC3|ACSM3|AKR1B10|ANKS4B|ANXA10|B4GALT4|BCL2L14|CA2|CD44|CDH3|CRYM|CTSE|DIRC2|DNAH2|DPP4|F5|FOXA2|FOXP1|GAL3ST1|GALNT12|GJC2|GNAI1|GRAMD4|GSDMB|GSTA4|HK2|HSD17B2|ITPR3|JAG1|KLK1|LGR4|MAOA|MCEE|MEGF6|MLXIP|MMP28|MUC13|NUCB2|PAPSS2|PDIA5|PDZD3|PFKFB2|PGAP1|PIK3C2B|PLXNA2|PPP1R1B|PRIMPOL|PROM1|PTGER4|RAB26|RAB27A|RASAL1|REG4|SIDT2|SIPA1L2|SLC5A1|SLC35A1|SOD3|ST6GALNAC1|SYT13|TNFRSF6B|TNFRSF11A|TNFRSF11B|TSPAN8
Human Embryo_Heim07_1515genes (17880687-TableS3)	23	ATP1B1|BLVRA|C6ORF141|CGN|CORO2A|CREB3L1|DUSP10|FAM174B|FAM214A|FLNB|FOXA3|GPRC5A|IQGAP2|MARC2|MTCL1|PGPEP1|PLEKHA6|RAB3B|RBM47|SERPINB6|SLC22A23|SYTL2|TFAP2A	8.15187029723e-05	113	0.000158863539865	ACVR2B|AFF3|AGL|ANXA11|APBB2|AQP11|ARHGAP29|ARHGAP44|B3GAT1|BCL6|BCOR|BMP4|BTG2|CAMK2N1|CARD10|CBX4|CDKN1B|CDS1|CNTNAP2|CRABP2|DACH1|DEPTOR|DGKQ|DHX32|DLX2|DUSP5|ENPP1|EPB41L1|ERBB3|FAM110B|FASN|FOXN4|FOXO6|GAD1|GATA3|GLRB|GLS2|GOLGA1|GREB1L|HES1|HIVEP3|HOXD4|HSPB8|HTR7P1|ICA1L|IFT22|IL6ST|ING5|IRX2|ISYNA1|ITPK1|ITPR2|KANSL3|KLHDC7A|LDLRAD4|LFNG|LIMCH1|LNX1|MAGI2|MARVELD2|MDM2|MED13L|MGST2|MSX2|MYRFL|NFIA|NRIP1|OLFM1|PABPC1L|PBX1|PDLIM1|PHYHD1|PPP1R13B|PREX1|PRRT3|PYCARD|RAB15|RAB38|RARA|RBPJ|REEP6|RET|RGMB|RHBDL3|RMST|RND1|SH3BP4|SHROOM2|SLC10A4|SLC16A5|SLC25A29|SPRED2|STK36|SUSD3|TACC2|TBX3|TCEAL3|TCERG1L|THSD4|TMEM135|TNRC18|TOX3|TRH|TRIM45|TRPS1|TSHZ1|TTC39C|TUFT1|VAV3|ZADH2|ZNF281|ZNF436-AS1|ZNF703	58	4.17386607961e-06	ABCG2|AHCYL2|ARHGAP26|ASRGL1|B3GALT5|BCL2L14|BLNK|C1ORF106|CA2|CCNDBP1|CD44|CHST6|EPHA2|EVA1C|FAM46A|FHL2|FOXP1|GALNT12|HK2|HPCAL1|HSD17B11|IGSF9|KLF3|KLF4|LAMC2|LEMD1|LGR4|MAP3K5|METRN|MIR22HG|MMP15|MOB3B|MRAP2|MTSS1|NMU|PHLDA2|PIK3C2B|PLEKHB1|PLXNA2|PROM1|RASD1|RIMS3|RNF152|S100A10|SEC24D|SERTAD2|SIPA1L2|SLC37A1|SMAD9|SRD5A3|SYT13|TLR3|TMPRSS2|TNFRSF21|TOX|TRIM14|ZC3H12C|ZIC2
Human Endometrial_Altmae09_145genes (19933690-TableS1)	6	FLRT3|PLEKHS1|SLITRK6|SPDEF|SPTSSB|TFF3	0.000186662981053	17	0.000311480413449	B3GAT1|BPIFB1|CLIC6|CXXC4|CYP4X1|FAM3B|FBXO2|FYB2|GLRB|MCOLN3|NPY1R|PDE8B|PROM2|PTPRT|SCGB3A1|SULT2B1|TRH	10	6.18455486571e-05	CLIC5|EDN3|FXYD4|HBA2|HBG1|KLK1|LCN2|MUC4|PLAC8|S100A2
Human Endometrial_Maxwell05_66genes (15930340-Table1)	6	AGR2|HGD|KIAA1324|RASSF6|TFF3|TMC5	0.000106517096532	7	0.000212616700548	CRABP2|CYP4X1|GAD1|MSX2|NPDC1|SCGB2A2|SLC38A1	6	4.17492515188e-07	ASRGL1|CD44|FOXA2|GCNT3|NT5E|PLA2G4A
Human HeadandNeck_Sengupta06_429genes (16912175-SuppTable3b)	33	ABLIM1|ADIRF|AGR2|C19ORF33|CAPN9|CFB|CGN|CIB1|DRC3|FAM149A|FAM174B|FUT2|LRG1|MS4A8|MUC1|NQO1|RSPH1|S100P|SCGB2A1|SERPINB6|SLC2A10|SLC44A4|SPATA18|TCEA3|TFF3|TJP3|TMC4|TMC5|TMEM45B|TRAK1|TSPAN1|UBXN10|WFDC2	1.42282111142e-25	107	3.17499294581e-54	ADSSL1|AGBL2|AK7|AKAP14|ALDH3B2|ANXA11|ARMC3|ARSD|B9D1|BBOF1|BNIPL|BPIFB1|C1ORF194|C9ORF116|C9ORF135|C11ORF52|C11ORF70|C11ORF88|C20ORF85|CABCOCO1|CAPSL|CASC1|CC2D2A|CCDC65|CCDC74A|CCDC96|CCDC113|CCDC114|CCDC173|CCNO|CDHR3|CFAP43|CFAP45|CFAP53|CFAP126|CFAP206|CLIC6|COBL|CXXC5|CYP4B1|DHCR24|DNAAF1|DNAH5|DNAH7|DNAH12|DNAI1|DNALI1|DYNLRB2|EFCAB2|EFHB|EFHC1|ERICH3|FAM3B|FAM81B|FANK1|FBXO15|FMO5|FOXJ1|IQCD|KIAA1211L|KLHDC9|LZTFL1|MDH1B|MSMB|NEK11|P4HTM|PIFO|PIH1D2|PRR15|PTPRN2|RALGPS2|RBM24|RIBC1|ROPN1L|RSPH4A|RSPH9|SAXO2|SELENBP1|SLC16A5|SLC22A4|SLC27A2|SNTN|SPA17|SPAG17|SPATA17|SPEF2|SYBU|SYTL4|TACC2|TEKT1|TEKT2|TEX9|TMEM190|TOX3|TPPP|TRAF3IP1|TTC9|TTC12|TTC29|VWA5A|WDR54|WDR63|WDR66|WDR78|ZBBX|ZMYND10|ZMYND12	36	2.84564222285e-25	ADGRF1|ALDH1L1|ANKRD37|AQP3|ASS1|B3GNT7|BACE2|C1ORF106|C1ORF116|CD55|CHST6|CLIC3|CXCL1|DMKN|DNAH2|EVA1C|GSTA1|LCN2|MFSD4A|MGLL|MT1E|MUC4|MUC13|NMU|PDZK1IP1|PI3|PIGR|PLCE1|PROM1|SLPI|ST6GALNAC1|TMPRSS4|TNFRSF21|TRIM7|VILL|VWA3B
Human Intestine_Jinawath04_75genes_DownRegulated (15273739-Table2)	6	FCGBP|SYTL1|SYTL2|SYTL5|TFF1|ZBTB7C	0.00042233824051	11	0.000844676481003	BICDL1|C5|CRIPAK|FAM3B|FBP1|FRY|GALNT6|HMGCS2|LYPD6B|SLC7A8|THSD4	18	1.74516773366e-14	ACSS2|AKR1B10|ASPRV1|ATP2A3|CA2|GIF|GSTA1|HPGD|IL1R2|MT1F|MT1X|MT2A|REG1A|REG1B|REG3A|SIDT2|TFF2|VSIG2
Human Lung_Boelens09_111genes (19334046-TableS3a)	7	DNAJC12|GALNT7|KIAA1211|KIAA1324|NQO1|RAB3B|TFF1	0.000289807637267	12	0.000579090753658	CEACAM5|CYP4F11|ENTPD3|FBXL7|JAKMIP3|LYPD3|MSMB|POLD4|RAB15|SLC12A2|SNAPC2|UMOD	10	5.24520875908e-07	AKR1B10|ANXA3|ASRGL1|B3GNT6|CYP3A5|GALNT5|RAB27A|SMCO4|TCN1|VSIG2
Human Lung_Coldren06_305genes (16877703-TableS2)	28	AGR2|C1ORF21|CAPN8|CCDC149|CGN|EPS8L1|FOXA1|KIAA0040|KRT19|LIPH|LRG1|MBOAT1|PTK6|QSOX1|RBM47|S100A14|S100A16|SLC1A1|SPINT1|SPTLC3|SYTL1|SYTL5|TC2N|TJP3|TMC4|TMC5|TMEM45B|TSPAN1	6.96908652845e-16	38	1.39381730569e-15	AIG1|ANXA9|AP1M2|ARFGEF3|CCDC57|CCDC115|CDS1|COBLL1|CST6|DOK7|EHF|ENPP4|ENPP5|ERBB3|FXYD3|GPR160|HMGCL|KIAA1211L|LNX1|MPP7|MYO6|NPNT|OVOL1|PRR15L|PRRG2|PSD4|RAB38|RASEF|REPS2|RHOD|SLC35A3|SPOPL|STARD10|STK39|SYNE4|TMEM125|VAV3|ZNF91	37	3.12618045298e-32	ACPP|ADGRF1|ATP2C2|B3GNT3|BICDL2|BLNK|C1ORF116|C6ORF132|CCNG2|CDH3|CRYBG1|CRYBG2|CYP2J2|ENDOD1|EPS8L2|GRAMD1C|GRHL3|GUK1|HS3ST1|KLK6|LAMC2|LEMD1|LIMA1|MST1R|NECTIN4|OVOL2|PITPNM3|PPL|PRSS8|SCEL|SERPINB5|SPINK2|TACSTD2|TMEM30B|TMEM54|TMPRSS4|TTC22
Human Lung_Hou10_518genes (20421987-TableS4)	29	AGR2|AGR3|C1ORF210|CAPN8|CFB|CGN|FOXA1|GOLM1|GPRC5A|HES2|INPP4B|INSM1|KIAA1211|KRT18|KRT19|MLPH|MUC1|NECTIN2|NTN4|PLLP|S100A14|S100A16|S100P|SLC44A4|SPDEF|SYTL1|TFAP2A|TJP3|TMC5	1.41249409816e-09	50	2.82498819631e-09	ABCC5|ADCY1|ARHGAP44|CBLN2|CDS1|COBL|COL4A5|COL4A6|CST6|DACH1|DHCR24|DNAH5|DNALI1|EFCAB2|ELOVL2|ENPP4|ENPP5|ERBB3|ESRRG|FAM110B|FMO5|FOXJ1|GCHFR|GDAP1|GLCCI1|GOLT1A|HPN|JUP|LIMCH1|LYPD3|MAST4|NOSTRIN|PBLD|PDE11A|PON2|PON3|PRR15L|RAB17|RAB27B|RAB38|RORC|SDC4|SLC1A4|STC2|STON2|SYNE4|TMEM125|TPRG1|WDR66|WDR72	45	5.74679331792e-24	ABCC3|AQP3|ATP1B3|C1ORF116|CD55|CLIC3|EVA1C|FOXD1|GJB5|GRHL3|HPGD|HSD17B11|JAG1|KLHL13|KRT6A|KRT6B|LAMB3|LCN2|LIMA1|LONRF3|MALL|MAOA|MFSD4A|MGLL|MSLN|MST1R|NECTIN4|NRARP|PIGR|PKP1|PLAC8|PPL|S100A2|S100A10|SERPINB1|SFTA2|SLC2A1|SLC4A4|SLC6A8|SLC6A14|SLC41A2|SUCLG2|TACSTD2|TMEM246|TRIM29
Human Lymphoma_Sriuranpong04_109genes (15297395-Table3)	7	CFB|CIB1|MUC1|MUC5B|S100P|SERPINB6|TFF3	1.72427457218e-05	16	3.26952752685e-05	BCL6|CACNB3|CEACAM6|DNALI1|ERBB3|FOXJ1|MCC|MDM2|MEIS3|NME5|PDE8B|SCNN1A|SELENBP1|SLC22A4|SLC27A2|VWA5A	10	1.79021617512e-06	ALDH1A1|CAST|CLMN|CYP2J2|EPHA2|KLF4|MGLL|PIGR|RARRES1|TACSTD2
Human Lymphoma_Sriuranpong04_373genes (15297395-SuppTable2)	15	ABLIM1|AGR2|ANG|CFB|CIB1|INPP4B|MUC1|MUC5B|RNASE4|S100P|SERPINB6|SYTL2|TFF3|TSPAN1|UBXN10	1.28146882052e-07	42	2.52525310123e-07	ABCC6|AKAP9|ALDH3A2|ARFGEF3|ATPAF2|BCL6|BRD8|CACNB3|CAP2|CDS1|CEACAM6|CEP126|CRIP2|DDO|DHCR24|DNALI1|ENPP3|ERBB3|FOXJ1|KCNS3|LRRC23|MAGED2|MCC|MDM2|MEIS3|NEBL|NME5|NOXA1|OSBPL6|PAX2|PDE8B|PER2|RAB21|SCNN1A|SELENBP1|SLC22A4|SLC27A2|SPAG8|SSBP4|VWA5A|ZBTB14|ZNF281	24	3.76845398198e-09	ALDH1A1|ASRGL1|ASS1|CAST|CCNI|CLMN|CYP2J2|EPHA2|F3|HSD17B2|INSR|KLF4|KLK10|MAOA|MGLL|NUCB2|PIGR|RARRES1|SLPI|TACSTD2|TCN1|TMPRSS2|VILL|VNN1
Human MesenchymalStemCells_Yamamoto08_1252genes (18318837-TableS1)	31	ABLIM1|BCAS1|C1ORF115|C6ORF141|CFB|DNAJC12|FAM174B|FLRT3|FOXA1|HES2|HGD|IQGAP2|KIAA1211|KRT8|LIPH|LRG1|MYRF|PKIB|PLEKHA6|RBM47|S100A14|SERPINA1|SERPINA3|SPINT1|TC2N|TMC5|TMEM45B|TSPAN15|UGT2B15|UGT2B17|UGT2B28	3.50177872664e-12	121	7.00296472608e-12	ABCA12|ABCC6|ABCC11|ABLIM2|ACMSD|ACSM1|ADCY1|AGT|ALDH8A1|AMDHD1|AMIGO1|ANXA9|APOF|AREG|AZGP1|C1ORF226|C2ORF15|C5|CCDC120|CELSR1|CERS4|CGNL1|CISH|COBL|COL4A5|COL4A6|CXXC4|CYP4B1|CYP4F11|CYP21A2|DACH1|DCAF10|DCDC2|DDO|DIO1|DNAH5|DOK7|DYDC2|EEF1A2|ENPP3|ENPP5|ERBB3|ETNK2|ETNPPL|F7|FAAH2|FAM3B|FBP1|FBXO2|FGF13|FGFR3|FYB2|GATM|GGTLC1|GJB1|GLYATL1|GOLT1A|GPRC5C|GUCY1A2|HMGCS2|HPN|HPX|IGFALS|IGFBP2|JUP|KIF5C|KIF12|LDLRAD4|LONRF2|LRP1B|LRP2|LRRC31|MARVELD2|MGAT4A|MS4A7|MST1|MUM1L1|NEBL|NEDD4L|NMNAT3|P2RY2|PAH|PARD6B|PCSK4|PCSK6|PDZK1|PKHD1|PRKAA2|PRR15L|PSD4|RAB3D|RAB17|RALGPS1|RASEF|REPS2|RETREG1|RND1|RNF43|SERPINA5|SERPINA6|SERPINC1|SLC9A3R1|SLC23A1|SLC27A2|SLC40A1|STARD10|STON2|SUSD3|SYNGR2|SYT12|SYT17|TCIM|TESMIN|TMC6|TMEM150C|TNFSF10|TTC39A|UNC5CL|WDR72|WWC1|ZNF385B	70	5.92727202104e-16	ABCC3|ABCG5|AFAP1L2|AIF1L|ALDH1A1|ALDH1L1|ALDOB|ANXA2|ANXA3|ANXA13|B3GNT3|BLNK|BMP2|C1ORF106|C1ORF116|C4BPA|C4BPB|C4ORF19|CA2|CCL20|CLMN|COLCA2|CYP2J2|DENND2D|DMKN|EGLN3|F5|FOXA2|GAL3ST1|GCH1|GCNT3|GDA|HSD17B2|IL1R2|KCNJ16|LAMA3|LAMC2|LCN2|LYZ|MAOA|MARK1|MMP7|MOB3B|NAT8|NR1H4|PAG1|PDZK1IP1|PIGR|PLA2G2A|PPL|PPP1R1B|PROM1|RARRES1|RASD1|RIMS3|SIPA1L2|SLC37A1|SLCO1B1|SLCO1B3|SLCO4C1|SLPI|SYT13|TACSTD2|TESC|TKTL2|TRIM15|TSPAN8|UGT2B4|UGT2B7|VNN1
Human Pancreas_Nakamura04_346genes (14767473-SuppTable2)	15	FCGBP|FGFR2|HGD|MS4A8|MTCL1|MUC5B|SHROOM3|SLC1A1|TFF3|TIPARP|TNIK|TP53INP1|TRPM4|VIPR1|ZBTB7C	0.000104459260956	36	0.000208918455804	ALDH3A2|AREG|CHADL|CTSF|CYB5A|DNALI1|EVL|FAM3B|FRY|GATM|GPATCH2|HPX|IFT46|LYPD6B|MST1|MTA1|MZF1|NEDD4L|NPNT|PBX1|PCGF3|PDZK1|RGL2|RTN4RL1|SEMA3F|SERPINA5|SERPINA6|SLC16A5|SLC40A1|TCIM|THSD4|TNRC18|TPPP3|WDR72|ZBTB42|ZNF385B	29	6.61085325048e-11	AKR1B10|ALDOB|ANPEP|ANXA13|ASRGL1|ATP2A3|B3GNT3|BTD|CA2|COLCA2|CRYM|CYP3A5|EVA1C|F5|HS3ST1|JOSD1|KCNJ16|MSLN|NRARP|PXMP2|REG1A|REG3A|SLC4A4|SLC5A1|SPCS3|TCN1|TLE1|TM4SF4|UGT2B7
Human Stomach_Zhao09_168genes (19306436-TableS2b)	11	ADIRF|ANG|C1ORF115|CACFD1|CAPN9|FCGBP|PLLP|PPP1R36|RETSAT|TSPAN1|ZBTB7C	0.00017076131713	20	0.00034152263426	ADAMTS15|AKR7A3|C5ORF30|CAPN13|COL4A6|CYB5A|CYB5D2|DGKD|DISP1|FAM102A|FBP1|FMO5|HMGCL|IDNK|LYPD6B|MAGI3|PRLR|PROM2|RORC|SELENBP1	40	1.52496274089e-27	ACOT11|ACSS2|ADTRP|AKR1B10|ALDOB|ANXA10|ATP2A3|BCO1|BTD|CDKN1A|CES3|CHST5|CTSE|CYP2C18|DEFA5|FA2H|FRMD3|GNA11|GSTA1|HPGD|HYAL1|IGSF9|IL1R2|KLF4|LDHD|LPAR5|MAOA|MMP28|MRAP2|MT1E|MYO1A|NR3C2|OSBPL7|SCIN|SIDT2|SSTR1|ST6GALNAC1|SUCLG2|VSIG2|ZDHHC3
IGARASHI_ATF4_TARGETS_DN	8	AGR2|ARRB1|NECTIN2|RAP1GAP|RNASE4|S100P|SLC22A18|TRAK1	3.03194586221e-05	16	1.54284073579e-05	ASPH|ATP9B|CDS1|CEACAM6|KCNS3|KIAA0232|NEBL|PER2|POF1B|PRR15|RETREG1|SFXN1|SLC1A4|SORL1|STC2|TMTC2	7	4.52105098862e-05	AP5M1|GNPTAB|KLF4|NAB1|PACSIN2|SEC24D|SUCLG2
LEF1_UP.V1_DN	14	AGR2|ATP1B1|C1ORF115|FAM83E|FOXA1|PLLP|RBM47|S100A14|SLC1A1|SLC22A18|SLC44A4|TFF1|TRPM4|TSPAN1	5.93654539934e-07	29	1.18730907949e-06	ACSF2|ALCAM|AP1M2|BDH2|DIXDC1|EFHD1|EHF|ENTPD3|FBXL15|KIAA0485|LIMCH1|MARC1|MRNIP|MST1L|MYRIP|PRR15L|PTPN13|PUDP|RAB27B|RETREG1|SELENBP1|SEMA3F|SH3BGRL|SORL1|TCEAL1|TMED3|TMEM53|TMEM135|TMEM144	28	3.7702822883e-16	ATP8A1|C4BPB|CCL20|CRYBG1|CXCL2|CYP2J2|DMXL2|DPP4|EFNB2|ERN2|GALNT12|GATA6|IL18|PAPSS2|PDZK1IP1|PF4|PLAC8|PRSS8|RAB26|SCG5|SLC6A20|SMPDL3A|TLR3|TM4SF1|TMPRSS3|TRAF3IP2|TSPAN8|VILL
LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_DN	20	ADIRF|AGR2|AGR3|CA12|CREB3L4|DNAJC12|EPN3|FAM214A|FOXA1|HID1|KIAA1324|KRT18|KRT19|PLEKHA6|RSPH1|SCGB2A1|SPDEF|TFF3|XBP1|ZG16B	6.60525808085e-10	54	6.46301702514e-46	ABAT|ABCC11|ACOT4|ACOX2|AP1M2|AR|ARSD|AZGP1|BPIFB1|C11ORF52|CCDC125|CEACAM6|COX6C|CST6|CYP4Z1|DACH1|DHCR24|DNALI1|DYNLRB2|EFHD1|ESR1|FSIP1|FXYD3|GATA3|HCAR1|INPP5J|KLHDC9|MANEAL|MMEL1|MYB|NAT1|NME5|NPDC1|P2RY2|PHOSPHO2|PIP|PRR15L|PTGER3|REEP6|RET|RTN4RL1|SCGB1D1|SCGB1D2|SCGB2A2|SLC9A3R1|SLC25A4|TBC1D9|TESMIN|TMEM25|TMEM125|TRPS1|TSTD1|TTC39A|VAV3	4	1.32105161617e-09	FBXL16|FRZB|MB|OVOL2
LIM_MAMMARY_LUMINAL_MATURE_UP	14	C1ORF210|DNAJC12|DRC3|DUSP10|EPS8L1|FOXA1|HID1|MBOAT1|MLPH|SLC22A18|SLC44A4|SPDEF|TSPAN1|TSPAN13	8.72786545115e-06	43	8.87229362912e-26	ABCC8|ALCAM|ALDH3B2|AQP11|ARFGEF3|BBOF1|BTRC|CACNB3|CACNG4|CITED1|DNAAF3|EEF1A2|ESR1|FAAH|FBXO36|FGF13|FYCO1|GADD45G|GPRC5C|HDAC11|HMGCS2|LMNTD2|MEIS3|MYB|PGR|PON3|PRLR|PROM2|PSD4|PVALB|RASEF|REEP6|SLC7A2|SLC16A5|SLC40A1|SULT2B1|TBX3|TOX3|TP53INP2|TRIM6|WNK4|WNT4|WNT7B	4	1.74557309023e-05	ACOT11|GMPR|NECTIN4|SGMS1
LIM_MAMMARY_STEM_CELL_DN	33	ATP1B1|C1ORF210|CACFD1|CGN|CIB1|CORO2A|CREB3L4|DNAJC12|FOXA1|GOLM1|HID1|IQGAP2|KIAA1324|KRT8|KRT18|KRT19|LIPH|MBOAT1|MLPH|MUC1|OSBPL10|P2RX4|RBM47|SIDT1|SLC22A18|SLC44A4|SPDEF|SPINT1|TFAP2A|TJP3|TMC4|VIPR1|WFDC2	4.89603306036e-14	75	7.57543805037e-19	ACOT4|ALDH3B2|ALKBH6|AP1M2|ARFGEF3|ARMT1|ARRDC1|ASB8|BNIPL|C11ORF52|CAMSAP3|CCDC125|CGNL1|CHCHD5|CHPT1|COBL|CTPS2|DBNDD2|DHCR24|DHRS4|DHX32|DLG3|ENPP4|ERBB3|ESR1|FAAH|FGF13|GATA3|GLUL|H2AFJ|HDAC10|HDAC11|HPN|IVD|LRBA|LYPD3|MAP3K1|MCCC2|MTA3|NAT1|PCBD2|PEX11G|PGAP2|PPM1H|PRLR|RAB3IP|RAB5B|RALGPS1|REEP6|RORC|RREB1|SERINC3|SFXN1|SHTN1|SLC9A3R1|SLC16A5|SLC25A35|SLC35A3|SLC35D2|SLC39A11|SMIM1|SORL1|SSH3|STARD10|STXBP2|SULT2B1|SYTL4|THNSL2|TMED3|TMEM125|TMEM128|TMEM135|TUFT1|WDR31|WNK4	28	9.79199036634e-14	CA2|CPT2|CRACR2B|CRB3|DENND2D|DMBT1|EHHADH|FRK|GABRP|KLK11|MB|MBOAT2|NECTIN4|PDZK1IP1|PGAP3|PPL|PPP1R1B|PXMP2|SGSM3|SLC5A1|SLC28A3|SLC35A1|SLC37A1|SQOR|TLR3|TMEM54|TMPRSS2|VILL
LIU_PROSTATE_CANCER_UP	11	C9ORF152|CREB3L1|ECI2|GALNT7|GOLM1|HID1|PDLIM5|RAP1GAP|TP53INP1|TRPM4|TSPAN13	3.35107506641e-05	17	1.25258385273e-07	AKR1A1|ARHGEF26|BCAM|CANT1|DNAH5|FBP1|GADD45G|GDF15|GJB1|GLYATL1|HPN|LRIG1|MYO6|RAB3D|RAB17|REPS2|SH3RF1	4	6.6896242943e-05	CCNG2|FNIP2|GMDS|PDIA5
LTE2_UP.V1_UP	13	ADIRF|C1ORF115|DUSP4|ECI2|EPN3|EPS8L1|GNA14|GOLM1|P2RX4|SERPINA1|SLC2A10|TNNT1|UNC13B	0.000120023269599	23	0.00024004561095	ACOX2|ALDH3B2|ALDH4A1|ASPH|CCDC170|CEACAM6|EHF|EPB41L1|FGFR4|HMGCS2|LONP2|MGAT4A|PIP|PPP1R3C|REEP1|RMND1|SASH1|SERHL2|SLC12A2|SORD|SORL1|SYT17|TMC6	19	9.28248746981e-10	ABCC3|ABCG2|APPL2|AQP3|ASRGL1|BACE2|C4ORF19|CLIC3|CLMN|FA2H|GALNT12|MAOA|MAP3K5|NUCB2|PGM1|PTGER4|RAB27A|RPS6KA5|TNFRSF11B
MASSARWEH_TAMOXIFEN_RESISTANCE_UP	26	ADIRF|ARRB1|BCAS1|CADPS2|CCDC149|CGN|EPB41L4A|EPN3|EPS8L1|FAM149A|FOXA3|HID1|INPP4B|IQGAP2|MUC1|PLEKHS1|PRODH|PTK6|S100A14|S100P|SMIM14|TCEA3|TMEM45B|TRAK1|TSPAN1|UNC13B	2.5424947435e-15	96	4.9581500876e-15	ABCC5|ABCC6|ALCAM|AR|ARFGEF3|ARHGAP35|ARHGEF37|ASPH|BBS4|BCAM|BCL6|CANT1|CDS1|CEACAM6|COBLL1|CRISP3|CYB561|DLX1|DRAIC|ERBB4|FAM129A|FAM198B|FAM234B|FFAR2|FGF13|FSIP1|FXYD3|GADD45G|GATA2|GLCCI1|GPR39|GPR160|GREB1L|HEXIM1|HMGCS2|HTR7P1|IDNK|IER3|KCNMA1|KIAA0485|LIMCH1|LNX1|LRPAP1|LRRC8E|LURAP1L|LYPD3|MGAT4A|MTA3|MTERF4|MUM1L1|NANS|NCEH1|NEBL|NFIA|OTUD7B|P2RY2|PBX1|PBX3|PIP4K2C|PP14571|PREX1|PROM2|PRR15L|PRRT3|PTPN13|RAB27B|RAI2|RBKS|RND1|RNF103|RORC|SASH1|SCCPDH|SEC16A|SERHL2|SH2D4A|SH3BGRL|SH3BP4|SLC12A2|SRARP|TACC2|TADA2B|TAPT1|TBC1D30|TMEM87B|TMEM135|TNFSF10|TP53INP2|TRIM62|TTC9|USP54|VPS13B|WWC1|YIPF1|ZNF827|ZNF839	53	1.268393994e-16	ANXA3|AQP3|ARF4|ARHGEF28|ATP2A3|ATP2C2|ATP8A1|BAIAP2|BLNK|C3ORF70|CASP7|CAST|CD55|CDH3|CRYM|CYP2J2|DAG1|ELL2|FAM46A|FAM114A1|FAS|GALNT12|GRAMD4|HDLBP|INPP1|JAG1|KDELR3|KLF3|KLF4|KRT80|LIMA1|MARK1|MB|MIR22HG|MTSS1|MUC2|NECTIN4|NUCB2|NVL|OSR2|PDE4D|PLBD1|PLD1|RASD1|RHOF|SLC4A11|SLC37A1|SLC41A2|SPINK4|SQOR|TACSTD2|TLN2|TMEM50B
MCBRYAN_PUBERTAL_BREAST_4_5WK_UP	11	C1ORF210|FGFR2|FOXA1|KIAA1324|KRT8|KRT18|KRT19|MBOAT1|SHROOM3|SPINT1|WFDC2	0.000103790433776	36	0.000207569358767	AREG|BCL6|BEX1|CITED1|CNTD1|CYB561|DUSP16|EHF|ERBB3|FHDC1|FXYD3|GATA3|HDAC11|IGFBP2|IRX2|IRX3|IRX5|ISYNA1|MYB|PATJ|PLAT|PLK2|POF1B|PRLR|PROM2|RAB17|RETREG1|SDC4|SLC39A6|STARD10|STC2|TLE3|TMED3|TPBG|TRPS1|WWC1	26	1.1508785378e-08	ABCC3|ALDH1A1|ALDOC|CAP1|CRACR2B|CTSE|CYSTM1|ERRFI1|F3|KCNK1|LCN2|MARK1|NHSL1|PDZK1IP1|PLAC8|PLEKHB1|PROM1|SCIN|SERPINB5|SLC2A1|SLPI|TACSTD2|TMEM30B|TMPRSS2|TSPAN8|UPK3A
MIKKELSEN_ES_ICP_WITH_H3K4ME3	19	C3ORF52|C9ORF152|DNAJC12|DRC3|FAM83E|FAM149A|FAM214A|FLRT3|LIPH|MLPH|NQO1|RASSF6|SLC2A10|SLC22A18|SLC44A4|TJP3|TMC4|TRAK1|WFDC2	0.000272662731706	76	0.000537565889997	ABCC6|ADIPOR2|ADPRHL1|APOF|ARMC3|BBS1|C1ORF56|C9ORF116|C11ORF49|C11ORF52|C16ORF45|CACNG1|CASQ1|CCDC65|CCDC114|CCDC160|COL4A5|CXORF40A|DNALI1|DPP7|DYNLRB2|EFCAB12|EFHB|ENPP3|ENTPD3|FAIM2|FAM198B|FBXO15|FNDC11|GDF15|GPR143|GSTT1|HOGA1|HSPB8|IDNK|INPP5J|IP6K2|MAATS1|MDH1B|MST1|MTERF2|MTHFR|NME5|NPFFR2|PAK6|PBLD|PBX1|PGAM2|PLAT|POLD4|PON3|PSD4|PYCARD|RAD51B|SH3BGRL|SMUG1|SPACA9|SPEF1|STC1|SUMF2|SYT1|SYTL4|TAL2|TCEAL1|TCIM|TKFC|TMEM63C|TMEM125|TMEM184A|TPPP3|TRIM6|TSNAXIP1|TTC12|TTLL9|UNC5CL|WDR63	41	7.7595734159e-06	ACPP|AK1|AKR1B10|ALDH1L1|ALDOC|ANXA3|ASPRV1|BAK1|CDA|CDC42EP5|CFC1|CXCL1|CXCL2|DNAH2|ECH1|EHHADH|GJB3|GJB5|GSTA4|HSD17B11|HYAL1|IL23A|KLC4|KRT17|LDHD|LIMA1|MALL|NECTIN4|NHSL1|OSBPL7|PCSK1|PRSS8|RAB13|RHBDL2|RNF125|RNF186|S100A13|TLR3|TRAF3IP2|TRIM10|TRIM29
MODULE_139	9	AGR2|FOXA1|KRT8|KRT18|KRT19|MLPH|MUC1|SYTL2|TJP3	0.000242565729741	29	4.64881014656e-18	ANKRD50|ANXA9|BCAM|CRABP2|CYB5A|ERBB3|FBP1|GATA3|GPR160|IRX5|ISOC1|MSX2|MYO6|NEBL|PRLR|PRR15L|RERG|RHOB|SCNN1A|SELENBP1|SFT2D3|SLC9A3R1|SULT2B1|SYT12|SYT17|TP53I11|TRPS1|UCP2|VAV3	3	0.000485131459482	AIF1L|B3GNT3|RAB26
MODULE_180	12	AGR2|FOXA1|HGD|KIAA0040|KRT8|KRT18|KRT19|MLPH|MUC1|S100P|SYTL2|TJP3	2.05446934673e-07	36	2.16250205496e-18	ANKRD50|ANXA9|BCAM|CDS1|CRABP2|CYB5A|ERBB3|FBP1|GATA3|GPR160|GSTT1|IRX5|ISOC1|JUP|MARC1|MSX2|MYO6|NAT1|NEBL|NPY1R|PRLR|PRR15L|RERG|RHOB|SCNN1A|SELENBP1|SFT2D3|SLC9A3R1|SLC38A1|SSH3|SULT2B1|SYT12|SYT17|TRPS1|UCP2|VAV3	9	4.10893869343e-07	AIF1L|AQP3|B3GNT3|DPP4|GDA|MMP7|PPL|RAB26|TSPAN8
MODULE_342	14	ADIRF|AGR2|FOXA1|FOXA3|GPRC5A|KIAA0040|KRT8|KRT18|KRT19|MLPH|MUC1|S100P|SERPINB6|WFDC2	1.52420232874e-08	35	3.04840465744e-08	ANXA9|AZGP1|BMP4|CEACAM6|CRABP2|CYB5A|DZANK1|FBP1|FXYD3|GATA3|GPC1|GPR160|HSPB8|IGFBP2|LMTK3|MARC1|MIPOL1|MYO6|NEBL|PRR15L|PXMP4|REEP6|RERG|RNF43|SCNN1A|SELENBP1|SH2D4A|SLC9A3R1|SLC38A1|SSH3|SYT17|TRPS1|TSC22D3|VAV3|WWC1	34	4.28835337002e-19	B3GNT3|BACE2|C4BPB|C4ORF19|CDH3|CDKN1A|CTSE|CYP3A5|EGLN3|EPHA2|EPS8L2|GDA|HPGD|HYAL1|KRT6A|KRT6B|KRT17|LAMC2|LGALS4|LYZ|MMP7|MST1R|MUC13|PLA2G2A|PLBD1|PPL|PRSS2|PRSS8|REG1B|SLPI|TACSTD2|TMEM246|TP53I3|TSPAN8
MOHANKUMAR_TLX1_TARGETS_DN	16	ABHD2|ADIRF|C3ORF52|FAM83E|GPRC5A|MUC1|RAB3B|S100A14|S100P|SERPINA3|SMIM14|ST6GALNAC2|STEAP1|STEAP2|TFF3|TNIK	1.63753465597e-08	29	2.14443264841e-08	ALCAM|AREG|ARHGEF37|BEX1|CEACAM6|CGNL1|CLGN|DCAF10|ERBB4|FAM198B|FGF12|FGF13|FOXN1|FXYD3|GAD1|GDF15|KCND3|KIF5C|LRP1B|LRRC49|PDE8B|PLA2G3|PPP1R26|PSD3|SCUBE2|SHC2|SPATA6|TOX3|TRIL	14	1.13063666352e-08	C1ORF106|CA2|CLIC3|EPHA4|GALNT12|GRHL3|HPGD|IL18|LAMB3|LAMC2|MGLL|PLD1|RASAL1|SERPINB5
Mouse StemCell_Fazzio08_1078genes (18614019-TableS4d)	14	DUSP10|FCGBP|INPP4B|LIPH|MARC2|PLLP|RAB3B|RIPK3|S100A14|SLC1A1|SLC22A18|TMC5|TSPAN1|WFDC2	0.00014465323739	76	0.000257581167525	ACSS1|ALCAM|ANO2|APOM|ARHGEF26|CCNO|CFAP45|CGA|CGNL1|CHPT1|CITED1|CNTNAP2|CSRNP2|CYB561D2|DNAH12|DUSP28|EFHB|EFR3B|ENPP1|FAM3B|FBP1|FBXL15|FBXO2|FBXO15|FICD|FOXO6|FRAT1|GCHFR|GLCE|GLUL|GPR160|HIVEP3|INTU|IRX2|ITPR2|KAZALD1|LEF1|LIMCH1|LIN7A|LONP2|LRPAP1|MACROD2|MGST2|MREG|MSX2|NMNAT3|NUDT12|NXNL2|PHACTR3|PLIN5|PSD4|PTPN13|RHBDL3|RND1|ROPN1L|RXRA|SFTPD|SLC7A8|SORD|STMN3|STOX1|SUSD3|TESMIN|THEM4|THNSL2|TLE6|TMED3|TMEM63C|TMEM175|TPPP3|TRAK2|TRH|TTC39C|ULK4|ZBBX|ZCWPW1	41	3.17253072548e-05	ABCC3|ANXA10|AQP3|ASPRV1|B3GALT5|BAIAP2|BCL2L14|CKMT1B|CLCA3P|CRYM|DLL1|DMKN|DNAH2|DPP4|DUOXA2|EHHADH|FOXA2|FXYD4|GALNT12|GSTA1|HMGN3|IL1R2|LAMA3|LGALS4|LONRF3|MARCH3|MGLL|MICU1|MSLN|MUC4|MYO1A|NAT8B|NDRG1|PLAC8|PRSS12|RARRES1|S100A13|SLC6A8|SPINK2|SQOR|TESC
ONDER_CDH1_TARGETS_2_DN	25	ABLIM1|ADIRF|CA12|CORO2A|DUSP10|EPN3|EPS8L1|FGFR2|FLNB|FLRT3|GPRC5A|INPP4B|KIAA0040|KRT8|KRT18|RBM47|S100A14|S100P|SERPINA1|SERPINA3|SPINT1|ST6GALNAC2|STEAP1|TSPAN1|TSPAN13	0.000353053836022	46	0.000706107672043	ABCA12|AP1M2|AREG|CAMK2N1|CDS1|CEACAM6|CELSR1|CELSR2|CNTNAP2|COBLL1|CST6|CYB5R1|CYB561|CYP4F11|EHF|ERBB3|EREG|FGFR3|FXYD3|GALNT6|HES1|IER3|JUP|LYPD3|MARC1|MAST4|MCOLN3|MGST2|MISP|MREG|P2RY2|PAK6|PIP4K2C|PLK2|RAB17|RAB38|RHOD|SCNN1A|SDC4|SEMA3C|SEMA3F|SLC7A8|SORL1|SYBU|TNFSF10|WWC1	77	3.94207391393e-38	ABCG2|ADTRP|ANXA3|AQP3|B3GNT3|B4GALT4|BACE2|BMP2|C1ORF106|C1ORF116|CA2|CASP1|CCL20|CCNG2|CD44|CD55|CDH3|COL17A1|CRYBG1|CXCL1|CXCL2|CXCL3|DSG3|EPS8L2|F3|GCH1|GJB3|GJB5|HS3ST1|IL1R2|IL18|KCNK1|KLK7|KLK8|KLK10|KLK11|KRT6A|KRT6B|KRT17|LAMA3|LAMB3|LAMC2|LCN2|LGR4|LIMA1|LPCAT4|MALL|MAOA|MARK1|MCTP2|MOB3B|MST1R|MTSS1|NDRG1|NMU|OVOL2|PI3|PLA2G4A|PPL|PRSS8|RIMS3|S100A2|SCEL|SERPINB1|SLC5A1|SLC6A8|SLC27A3|SLC39A8|SLPI|SPCS3|TACSTD2|TGFA|TMEM30B|TMPRSS4|TNFRSF21|TRIM29|VDR
PEDERSEN_METASTASIS_BY_ERBB2_ISOFORM_4	7	AGR2|CADPS2|GOLM1|KIAA1211|NTN4|TMEM45B|UGT2B15	1.44057869609e-05	19	2.88114912215e-05	ASPH|C1ORF226|CGNL1|CROT|DHRS2|ELOVL2|FAM110C|GFRA1|ISOC1|ITPRIPL2|MSMB|MUM1L1|MYB|PTGER3|PTPN13|RETREG1|SLC1A2|TMC6|TTC9	18	8.27002555617e-11	ABCC3|AQP3|ARSJ|ASS1|B3GNT3|CA2|CLVS1|ELL2|ETV5|FHL2|IL18|LAMC2|MAOA|MT1X|MT2A|PHLDA2|PLD1|SYT13
PEDERSEN_METASTASIS_BY_ERBB2_ISOFORM_7	20	ARRB1|BCAR3|C3ORF52|C6ORF141|CA12|CREB3L4|EPS8L1|FLJ23867|GNA14|KIAA1324|LRP10|MARC2|RAB3B|S100A16|STEAP1|SYTL1|TFF3|TJP3|TSPAN1|XBP1	1.50343457816e-10	63	2.9902816855e-10	ACSS3|AKR7A2|ALDH3B2|ANXA9|C17ORF97|CACNA1D|CRNDE|CTNND2|CYP4B1|DNAJC22|DRAIC|DUBR|DZIP3|EFHD1|ENTPD3|ESR1|FAM110B|FAM234B|FBP1|FXYD3|GLCCI1|GPC1|GPD1L|HMGN5|HSPB8|IFT122|ITPK1|LCORL|LDLRAD4|LINC01116|LONRF2|LRIG1|MARC1|MCCC2|MNS1|MTERF2|NPNT|PBX1|PIK3R1|PPP1R3C|PREX1|PRLR|PRR15|RBM4B|RERG|RIIAD1|RMND1|SFXN2|SH3BGRL|SH3RF1|SLC1A4|SLC4A7|SLC16A6|ST20-AS1|STC1|STC2|TAB3|TBC1D9|TCEA2|TMEM150C|TOM1L2|WWOX|ZNF689	36	1.65874708286e-12	ABCG2|AIF1L|ANXA2|B4GALT4|CA8|CD44|CD55|CDKN1A|CLIC3|CLTB|CYP2J2|CYSTM1|ERO1A|HK2|HMGN3|HPCAL1|IER5|IL1R2|JAG1|LDLR|LGR4|MBOAT2|MGLL|MST1R|NT5E|OSR2|PXMP2|RHOF|RPS6KA5|S100A2|SLC35A1|SQOR|TGFA|TMEM30A|TMPRSS3|VDR
PID_HNF3A_PATHWAY	5	FOXA1|FOXA3|SERPINA1|TFF1|XBP1	0.000744308749276	7	0.000832964878744	AR|CDKN1B|ESR1|NFIA|NKX3-1|NRIP1|SFTPD	3	0.000655652619808	C4BPB|CYP2C18|FOXA2
POOLA_INVASIVE_BREAST_CANCER_DN	9	ACADSB|CA12|DNAJC12|FLNB|INPP4B|NQO1|SERPINA3|UGT2B28|WFDC2	2.40325628636e-08	50	1.8029057354e-23	ACSM1|AK5|ALDH4A1|ARMT1|AZGP1|CACNA1D|CCDC170|CELSR1|CELSR2|CITED1|COL4A5|CPB1|CYP4B1|DACH1|ERBB4|EREG|ESR1|FBXO2|FGFR3|GATA3|GFRA1|GOLGA2P5|GRIA2|GSTT1|HMGCS2|IGF1R|IGFBP2|IGSF1|KDM4B|MAPT|MSX2|MYB|NEDD4L|NPY1R|PDZK1|PIK3R1|PLAT|PPIP5K1|PPP1R3C|RABEP1|SCUBE2|SDC4|SERPINA5|SLC39A6|SSH3|STC1|STC2|SYT17|TAPT1|TP53I11	15	4.80651257271e-08	ANPEP|CLMN|EDN3|FRZB|HBB|IFT140|KLK10|KRT6B|KRT17|LAMB3|LGALS4|MATN2|PKP1|SERPINB5|TESC
RAF_UP.V1_DN	15	ABLIM1|AGR2|CA12|DNAJC12|INPP4B|KIAA1324|S100A14|SERPINA3|SIDT1|SLC1A1|SYTL2|TFAP2A|TFF1|TFF3|UGDH	6.92037172205e-06	55	1.37598382089e-21	ABAT|ABCA12|ALCAM|APBB2|ARL3|ARNT2|ASCL1|BCL2|C16ORF45|CCDC170|CCND1|CELSR2|DLG5|ELOVL2|FAM234B|FTO|GDAP1|GFRA1|GPATCH2|GPC4|GREB1|HDGFL3|HSPB8|IGF1R|IGFBP2|IL24|IRS1|IRX5|LRIG1|MED13L|MEGF9|MSMB|MYB|NEDD4L|NPY1R|PCGF3|PCSK6|PDZK1|PGR|PKP4|PLK2|PPP1R3C|SCUBE2|SELENBP1|SH3BGRL|SHROOM2|SLC7A2|SLC19A2|STC2|TBC1D30|TMEM268|TRPS1|TSC22D3|TTC39A|VAV3	10	1.38407434441e-05	CBFA2T3|CLIC3|CRYBG1|EFNB2|OSR2|SLC6A14|SLC39A8|TCN1|TM4SF1|TMPRSS3
RICKMAN_HEAD_AND_NECK_CANCER_D	6	AGR2|KIAA1324|MUC5B|TFF3|TMC5|ZG16B	0.00045830681736	5	0.000915577260569	AZGP1|BPIFB1|BPIFB2|MSMB|SCGB3A1	5	1.03637415141e-06	DMBT1|PIGR|PROM1|PRR4|TCN1
SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_UP	18	AGR2|CORO2A|FAM149A|FGFR2|FOXA1|HSPA2|KRT19|MBOAT1|NQO1|PLLP|RNASE4|S100A14|SLITRK6|SPINT1|TIPARP|TMC4|TSPAN1|TSPAN13	3.51239144999e-06	62	7.02478087954e-06	ACSS1|AFF1|ANXA9|ARHGEF26|ASB13|ATP8A2|BCL2|BDH2|C5ORF30|CARD19|CBLN2|CLIC6|COBLL1|COL4A5|COL4A6|CROT|DCDC2|DCXR|DLG3|ELOVL2|ENPP5|ERGIC1|FAM110C|FGF12|FGFR3|FXYD3|GADD45G|GATA3|GLUL|HOXD8|IGFBP2|LYPD6|MKX|MPP7|NKX3-1|NRIP1|PHYHD1|PROM2|PRR15|PTPN13|RAB3IP|RAB15|RAB17|RALGPS2|RAMP1|RBBP7|SCNN1A|SERINC3|SLC12A2|SLC40A1|SP5|STARD10|STC2|SUOX|SUSD3|TCIM|TLE6|TMEM184A|TSC22D3|TUFT1|VWA5A|WNT4	45	2.02044266823e-12	ACSM3|AHCYL2|AIF1L|ALDH1A1|ANXA3|AQP3|ATP2C2|B4GALT4|C1ORF116|C5ORF15|C6ORF132|CAPN5|CDH3|CKMT1B|CRYBG1|CYSTM1|DENND2D|EMP2|ENDOD1|ERRFI1|EVA1C|FXYD4|GSTA4|HMGN3|HPGD|KCNJ16|KCNK1|MMP7|MT2A|NAMPT|NT5E|PLA2G4A|PLAC8|PLXNA2|PPL|PXMP2|RASD1|RRAS2|SLC9A2|SLC39A8|SLCO4C1|TACSTD2|TESC|TLE1|TMPRSS2
SCHUETZ_BREAST_CANCER_DUCTAL_INVASIVE_DN	12	ACADSB|CADPS2|DNAJC12|EPN3|FAM174B|GALNT7|KIAA0040|KIAA1324|MLPH|SERPINA1|TJP3|XBP1	5.92279217785e-08	31	5.13308429509e-21	ABAT|ABCD3|ALDH3B2|ANXA9|AREG|ARHGAP29|CELSR1|CELSR2|ERBB3|ERBB4|FAM234B|GDF15|ISOC1|LETM1|LRBA|MAGED2|MAST4|MRPS30|MYB|MYO6|PLK2|PRKAR2B|SCNN1A|SLC1A4|SLC19A2|SLC27A2|STC2|TBX3|TTC39A|VAV3|WFS1	6	1.18455843557e-07	GRAMD1C|IER5|LAMA3|PDZK1IP1|PROM1|TM4SF1
SENGUPTA_NASOPHARYNGEAL_CARCINOMA_DN	33	ABLIM1|ADIRF|AGR2|C19ORF33|CAPN9|CFB|CGN|CIB1|DRC3|FAM149A|FAM174B|FUT2|LRG1|MS4A8|MUC1|NQO1|RSPH1|S100P|SCGB2A1|SERPINB6|SLC2A10|SLC44A4|SPATA18|TCEA3|TFF3|TJP3|TMC4|TMC5|TMEM45B|TRAK1|TSPAN1|UBXN10|WFDC2	4.60098822058e-26	112	2.8317838931e-57	ADSSL1|AGBL2|AK7|AKAP14|ALDH3B2|ANXA11|ARMC3|ARSD|B9D1|BBOF1|BNIPL|BPIFB1|C1ORF194|C9ORF116|C9ORF135|C11ORF52|C11ORF70|C11ORF88|C20ORF85|CABCOCO1|CAPSL|CASC1|CC2D2A|CCDC65|CCDC96|CCDC113|CCDC114|CCDC173|CCNO|CDC20B|CDHR3|CFAP43|CFAP45|CFAP53|CFAP126|CFAP206|CLIC6|COBL|CXXC5|CYP4B1|DHCR24|DNAAF1|DNAH5|DNAH7|DNAH12|DNAI1|DNALI1|DYNLRB2|EFCAB2|EFHB|EFHC1|ERICH3|FAM3B|FAM81B|FANK1|FBXO15|FMO5|FOXJ1|IQCD|KIAA1211L|KLHDC9|LOC100506844|LZTFL1|MDH1B|MSMB|NEK11|OSCP1|P4HTM|PIFO|PIH1D2|PRR15|PTPRN2|RBM24|RIBC1|ROPN1L|RSPH4A|RSPH9|SAXO2|SELENBP1|SLC16A5|SLC22A4|SLC27A2|SMIM22|SMIM34A|SNTN|SPA17|SPAG17|SPATA17|SPEF2|SYBU|SYTL4|TACC2|TEKT1|TEKT2|TEX9|TMEM190|TOX3|TPPP|TPPP3|TRAF3IP1|TTC9|TTC12|TTC25|TTC29|VWA5A|WDR54|WDR63|WDR66|WDR78|ZBBX|ZMYND10|ZMYND12	37	9.20197644115e-26	ADGRF1|ALDH1L1|ANKRD37|AQP3|ASS1|B3GNT7|BACE2|C1ORF106|C1ORF116|CAPN5|CD55|CHST6|CLIC3|CXCL1|DMKN|DNAH2|EVA1C|GSTA1|LCN2|MFSD4A|MGLL|MT1E|MUC4|MUC13|NMU|PDZK1IP1|PI3|PIGR|PLCE1|PROM1|SLPI|ST6GALNAC1|TMPRSS4|TNFRSF21|TRIM7|VILL|VWA3B
SMID_BREAST_CANCER_BASAL_DN	66	ACADSB|ADIRF|AGR2|BCAS1|BLVRA|C1ORF21|C3ORF52|CA12|CAPN9|CASD1|CATSPERB|CFB|CREB3L1|CRIP1|DNAJC1|DNAJC12|DUSP4|EPS8L1|FAM83E|FAM174B|FLRT3|FOXA1|FUT8|GALNT7|GNA14|GPRC5A|HGD|HSPA2|INPP4B|IQGAP2|KCNJ3|KIAA0040|KIAA1324|KRT8|KRT18|KRT19|MLPH|MUC1|NQO1|PTK6|RBM47|RNASE4|SIDT1|SLC1A1|SLC2A10|SLC22A18|SLC44A4|SMIM14|SPDEF|ST6GALNAC2|STS|SYTL2|TFF1|TFF3|TJP3|TMC5|TNIK|TNNT1|TRAK1|TSPAN1|TSPAN13|UGDH|UGT2B15|UGT2B28|VIPR1|XBP1	1.3967907711e-14	319	2.18602050921e-203	ABAT|ABCA12|ABCC6|ABCC8|ABCG1|ABLIM3|ACOX2|ADCY1|ADCY9|ADGRB2|AGL|AK5|AKR7A3|ALCAM|ALDH3B2|ALDH4A1|ANXA9|APBB2|AR|AREG|ARHGAP32|ARHGAP35|ARL3|ARMT1|ASAH1|ASCL1|ASPH|ASTN2|ATP7B|ATP8A2|ATRNL1|AZGP1|B9D1|BAIAP3|BBS4|BCAM|BCAS4|BCL2|BEX1|BMP4|BMPR1B|BTG2|C5ORF30|C9ORF116|C16ORF45|CACNA1D|CACNA2D2|CACNG1|CACNG4|CAMK2N1|CANT1|CASC1|CCDC106|CCDC170|CCND1|CCNO|CDS1|CEACAM5|CEACAM6|CELSR1|CERS4|CERS6|CFAP45|CFAP69|CHAD|CHRD|CITED1|CLBA1|CLGN|CLSTN2|CNTNAP2|COL4A5|COL4A6|COQ4|CPB1|CRAT|CRIP2|CRISP3|CROT|CSAD|CX3CR1|CXXC4|CYB5A|CYB561|CYBRD1|CYP2B7P|CYP2E1|CYP4B1|CYP4F8|CYP21A2|DACH1|DCAF10|DCXR|DDO|DEPTOR|DGKD|DHCR24|DHRS2|DIO1|DLG3|DLG5|DNAAF1|DNALI1|DNMBP|DUSP5|DZANK1|DZIP3|EEF1A2|EFCAB2|EFHC1|EGOT|ELOVL2|ELOVL5|ENPP1|ENTPD3|ERBB3|ERBB4|ESR1|ESRRG|EVA1B|EVL|F7|FAAH|FAH|FAIM2|FAM110B|FAM198B|FAM234B|FASN|FBP1|FBXL7|FGFR3|FMO5|FRY|GALNT6|GAMT|GATA2|GATA3|GDF15|GFRA1|GLRB|GNMT|GOLGA2P5|GP2|GPD1L|GPRC5C|GREB1|GREB1L|GRIA2|HDAC11|HEBP1|HMGCS2|HPN|HPX|HSPB1|HSPB8|IFT122|IGF1R|IL6ST|INPP5J|IRS1|IRX5|ISYNA1|IVD|KAT6B|KAZALD1|KCND3|KCNE4|KCNK15|KCNMA1|KDM4B|KIAA0485|KIF5C|KIF16B|LDLRAD4|LIAS|LIN7A|LONP2|LRBA|LRIG1|LRRC6|LRRC31|MAGED2|MAK|MAPT|MARC1|MAST4|MCCC2|MED13L|MEGF9|MISP|MKNK2|MREG|MRPS30|MSMB|MSX2|MYB|MYO6|MZF1|NAT1|NAT2|NEBL|NEDD4L|NKAIN1|NME5|NPDC1|NPY1R|NRIP1|PAN2|PATJ|PAX2|PBLD|PBX1|PCSK6|PDZK1|PEX11A|PGR|PIEZO2|PIP|PLAT|PLCL1|PNPLA2|PNPLA4|POLD4|PP14571|PPDPF|PPIP5K1|PPP1R3C|PRLR|PSD3|PTGER3|PTP4A2|PTPRN2|PTPRT|PVALB|QDPR|RAB17|RAB27B|RAB38|RABEP1|RAI2|RALGPS1|RALGPS2|RARA|REEP1|REPS2|RET|RETREG1|RHBDL1|RHOB|RMND1|RND1|SCCPDH|SCGB1D2|SCGB2A2|SCGN|SCNN1A|SCUBE2|SEC14L2|SELENBP1|SEMA3C|SERHL2|SERPINA5|SERPINA6|SH3BGRL|SIGLEC15|SLC1A4|SLC4A7|SLC4A8|SLC7A8|SLC9A3R1|SLC16A6|SLC19A2|SLC26A3|SLC27A2|SLC35E3|SLC38A1|SLC39A6|SLC48A1|SORD|SORL1|SPAG16|SPHK2|SREBF1|SSH3|SSTR2|STC2|STK32B|STK39|SYBU|SYT1|SYT17|TBC1D9|TBC1D30|TBX3|TCEAL4|TESMIN|TFAP2B|TKFC|TNFSF10|TOX3|TP53TG1|TPPP3|TRIL|TRIM3|TRIM36|TTC9|TTC12|TTC39A|UCN|UCP2|UGCG|VAV3|WWOX|WWP1|ZMYND10|ZNF91|ZNF446|ZNF839	18	2.79358154221e-14	ABCC3|ALDH1A1|ATP2A3|ATP8A1|BRINP3|CBFA2T3|CCNG2|FDXR|HPGD|IFT140|MAOA|METRN|NUCB2|PGAP3|RAB26|TCN1|TMEM30B|TSPAN8
SMID_BREAST_CANCER_ERBB2_UP	12	C2ORF72|CATSPERB|MUC1|NQO1|PLEKHA6|PRODH|SLC2A10|SLC44A4|TMC5|TRPM4|TSPAN1|UGT2B28	4.2156376487e-09	27	8.43126489816e-09	ABCA12|ABCC6|ALCAM|ALDH3B2|ALDH4A1|AR|ASPH|CEACAM6|CRISP2|CRISP3|CYB561|FAIM2|FASN|FFAR2|GALNT6|HMGCS2|HPX|LRRC31|PEX11A|PIP|SCGB1D2|SCGB2A2|SCNN1A|SERHL2|TFAP2B|TRIM3|UCP2	22	1.03992373452e-14	ABCC3|AKR1B10|AQP3|ASS1|ATP2C2|BRINP3|CLIC3|CRYBG1|ELL2|FA2H|FUT3|GSDMB|LDLR|MMP15|NVL|PAPSS2|PGAP3|SEC24D|SLC37A1|SLPI|TMPRSS2|TSPAN8
SMID_BREAST_CANCER_LUMINAL_B_UP	21	ACADSB|AGR2|CA12|CRIP1|DNAJC1|DNAJC12|FGFR2|FLRT3|FOXA1|INSM1|KCNJ3|KRT18|MLPH|SERPINA3|SLC1A1|TFF1|TFF3|TJP3|TNNI3|TNNT1|WFDC2	1.31981568229e-06	102	1.5775806441e-84	ABAT|ABCC8|ACOX2|AGL|ANXA9|ARMT1|ARNT2|ASCL1|B9D1|BAIAP3|BMPR1B|C9ORF116|CACNA1D|CACNA2D2|CACNG4|CASC1|CCDC106|CCND1|CEACAM5|CELSR1|CELSR3|CGA|CLSTN2|CRABP2|CYP2B7P|DACH1|DCAF10|DIO1|DNALI1|EEF1A2|ENPP1|ERBB4|ESR1|EVL|FAM234B|FBP1|GATA3|GDF15|GFRA1|GLRB|GLS2|GP2|GREB1|GRIA2|HDAC11|HEXIM1|HPN|IFT122|IL6ST|IL24|ISYNA1|KCNE4|KCNK15|KDM4B|KIF5C|LDLRAD4|MAGI2|MAPT|MCCC2|MRPS30|MSMB|NAT1|NKAIN1|NPY1R|PCSK6|PIEZO2|PPP1R3C|PTPRT|PVALB|QDPR|RABEP1|REPS2|RET|RETREG1|RHBDL1|SCCPDH|SCUBE2|SERPINA5|SERPINA6|SIAH2|SLC9A3R1|SLC19A2|SLC27A2|SLC39A6|SORD|SPAG16|SREBF1|SSTR2|STC1|STK32B|SYBU|SYT1|SYT17|TBC1D9|TBC1D30|TESMIN|TOX3|TPPP3|TTC12|UGCG|WWP1|ZMYND10	3	2.63963136459e-06	METRN|RAB26|SPINK4
SMID_BREAST_CANCER_RELAPSE_IN_BONE_UP	18	ACADSB|AGR2|BCAS1|CA12|CAPN9|CRIP1|DUSP4|GALNT7|INPP4B|MLPH|MUC1|SCGB2A1|SLC1A1|SLC44A4|SPDEF|TFF1|TFF3|TSPAN1	2.50240881949e-08	54	1.24250412298e-50	ABAT|ANXA9|ASCL1|ATRNL1|C9ORF116|CCNO|CEACAM5|CEACAM6|CELSR1|CHAD|CITED1|CLGN|CPB1|CYP2B7P|DNALI1|ESR1|EVL|FAIM2|FBP1|FGFR3|GALNT6|GATA3|GFRA1|GP2|HMGCS2|HPX|IL24|INPP5J|KAZALD1|KIF5C|LIN7A|LRP1B|MAST4|MSMB|NAT1|PAH|PLK2|PP14571|PSD3|PTPRT|REPS2|RETREG1|RND1|SCCPDH|SCGB1D2|SCGB2A2|SCUBE2|SERPINA5|SLC4A8|SLC19A2|SLC39A6|SYT1|TOX3|TTC12	2	5.00481763898e-08	MB|PGAP3
SMID_BREAST_CANCER_RELAPSE_IN_BRAIN_DN	15	ADIRF|AGR2|CA12|CRIP1|DNAJC12|FOXA1|KIAA1324|MLPH|RBM47|SIDT1|SLC44A4|SPDEF|ST6GALNAC2|TFF3|TJP3	9.7185664074e-06	54	6.12076071824e-53	ALCAM|AR|ARMT1|ASAH1|ASTN2|CCNO|CDS1|CELSR1|CHST8|CLGN|COL4A5|CXXC4|CYP4B1|DACH1|DCAF10|DEPTOR|DNALI1|ERBB3|ERBB4|ESR1|EVL|GALNT6|GATA3|GOLGA2P5|GREB1|IL6ST|INPP5J|IVD|KDM4B|LIN7A|MAPKBP1|MAPT|MAST4|MCCC2|NPDC1|NRIP1|PP14571|PSD3|QDPR|RAB27B|RET|SELENBP1|SERPINA5|SLC4A8|SLC7A8|SLC19A2|SLC27A2|STK32B|TBC1D9|TOX3|TTC9|VAV3|ZNF91|ZNF446	0	1.94371328148e-05	
Sadanandam(PMID:23584089)_Goblet-like	26	AGR2|AGR3|BCAS1|C9ORF152|CRIP1|DUSP4|FCGBP|FGFR2|FOXA3|HEPACAM2|HGD|HSPA2|KIAA1324|MLPH|MUC1|MUC5B|SBSPON|SCGB2A1|SDR16C5|SERPINA1|SLITRK6|TC2N|TFAP2A|TFF1|TFF3|WFDC2	1.15756647445e-08	4	2.31513294889e-08	ADRB1|MELTF-AS1|RAB27B|TBX3	53	8.56422515116e-85	ANXA13|AQP3|BLNK|CCL24|CD55|CLCA1|COLCA2|CPS1|CTSE|DEFA5|DEFA6|DMBT1|DUOX2|DUOXA2|EPHA4|F3|FFAR4|FUT3|GABRP|GNE|IL1R2|ITLN1|KLF4|KLK11|L1TD1|LAMA1|LCN2|LINC00261|LYZ|MATN2|MUC2|MUC4|NR3C2|PCSK1|PLA2G4A|PTGER4|REG1A|REG1B|REG3A|REG4|RETNLB|RHBDL2|SERPINB5|SLC28A3|SLC39A8|SMAD9|SPINK4|SSTR1|ST6GALNAC1|TCN1|TNFRSF11A|TOX|VSIG2
VANTVEER_BREAST_CANCER_ESR1_UP	20	ACADSB|AGR3|BAG1|CA12|CPEB2|DNAJC12|EML2|FAM174B|FOXA1|FUT8|HID1|KRT18|RBM47|SPDEF|TFF3|TMC4|TP53INP1|TSPAN13|XBP1|ZG16B	1.4729840725e-06	103	1.23715150244e-85	ABAT|ACOT4|AFF1|BCL2|BHLHE40|BRD8|C3ORF18|C5ORF30|C9ORF116|CCDC74B|CCDC96|CCDC106|CELSR1|CERS2|CERS6|CHAD|CHRD|CISH|COX6C|CXXC5|CYB5R1|DBNDD2|DNALI1|ELOVL5|ERBB3|ERBB4|ESR1|EVA1B|EVL|FAAH|FAM102A|FAM110C|FARP2|FBP1|FGD3|GADD45G|GATA3|GFRA1|GLI3|GPD1L|GREB1|HDAC11|HEXIM1|HHAT|HMGCL|HTT|IL6ST|INPP5J|IRS1|ITPK1|KDM4B|KIAA0232|KIF12|KIF16B|KLHDC9|LONRF2|LRBA|LRIG1|LRRC73|LZTFL1|MAGED2|MAN2B2|MAST4|MCCC2|MED13L|MEIS3P1|MREG|MYB|NAT1|NEDD4L|NPDC1|P4HTM|PBX1|PCSK6|PHYHD1|PIGT|PPP1R26|PREX1|PRR15|PTP4A2|PTPRT|QDPR|RARA|RETREG1|RNF103|SCCPDH|SCUBE2|SEC14L2|SLC9A3R1|SLC16A6|SLC39A6|SPEF1|SREBF1|STARD10|SUSD3|SYBU|TBC1D9|TCEAL1|TMBIM4|TMBIM6|TPBG|UGCG|VAV3	4	2.945968145e-06	APPL2|BTD|CCNG2|OVOL2
VECCHI_GASTRIC_CANCER_ADVANCED_VS_EARLY_DN	15	C9ORF152|CAPN9|CRIP1|EPN3|GOLM1|HEPACAM2|HGD|KIAA1324|MLPH|MS4A8|MUC1|S100P|TFF3|TMC5|TMEM45B	6.8902317937e-06	16	1.37804635874e-05	ARFGEF3|CAPN13|CHCHD5|ENTPD3|FXYD3|GP2|LOC728613|NAT1|NAT2|POLD4|PTPRN2|REEP6|STARD10|SYBU|WNK4|ZBTB7B	36	1.6353153927e-31	ABCG2|ABCG5|AK1|ALDOB|BLNK|BTD|CA2|CDC42EP5|CLDN18|CPS1|CYSTM1|ETHE1|GCNT3|GMDS|GPA33|GSDMB|HBB|HSD17B2|LGALS4|LINC01133|LPCAT4|NMU|PRSS2|PRSS3|REG1A|REG3A|REG4|SERPINB1|SLC4A4|SLPI|SSTR1|TFF2|TM4SF20|TMPRSS2|VILL|VSIG2
WAMUNYOKOLI_OVARIAN_CANCER_GRADES_1_2_UP	12	ABHD2|AGR3|ATP1B1|BAG1|C3ORF52|GALNT7|IQGAP2|MUC1|NQO1|RASSF6|S100A14|SYTL2	4.0765646648e-05	17	8.1531292887e-05	ABCD3|ARSD|CXXC5|ERBB3|GPR160|MYO6|PBLD|RASEF|SFXN1|SH2D4A|SH3RF1|SLC35A3|SLC35D2|SLC39A11|STK39|TOX3|UNC5CL	19	4.08959884244e-13	ABCC3|ASPHD2|CA2|CTSE|DOK4|ELL2|FNIP2|GDA|GMDS|KCNK1|LYZ|PDIA5|PHLDA2|PLAC8|SGSM3|STXBP5|SYT13|TMEM30B|TSPAN8
WAMUNYOKOLI_OVARIAN_CANCER_LMP_UP	24	AGR2|AGR3|ATP1B1|BAG1|C3ORF52|C9ORF152|C19ORF33|CACFD1|CIB1|FAM174B|FLNB|FUT2|GALNT7|IQGAP2|MLPH|MUC1|NQO1|SLC2A10|SLC22A23|SYTL2|TC2N|TJP3|TMC5|TRAK1	6.92429925274e-08	32	1.38485985053e-07	AACS|ABCD3|ARRDC1|ARSD|CAMK2N1|CANT1|CCND1|CHPT1|CXXC5|EHF|ERBB3|FAM213B|FMO5|FXYD3|GPR160|IER3|MARVELD2|MKNK2|MYO6|NANS|PLEKHH1|PPDPF|PSD4|RASEF|SLC35A3|SLC35D2|STARD10|TMC6|TMEM125|TNFSF10|TOX3|UNC5CL	29	1.83067717301e-18	ABCC3|BACE2|C1ORF116|C4ORF19|CDC42EP5|CRB3|CTSE|DOK4|EPS8L2|FA2H|FNIP2|GMDS|GNA11|HDLBP|HIP1R|HPGD|MGLL|MRAP2|OVOL2|PACSIN2|PLAC8|SERPINB1|SGSM3|STYK1|TACSTD2|TMEM30B|TSPAN8|TTC22|VSIG2
WANG_BARRETTS_ESOPHAGUS_AND_ESOPHAGUS_CANCER_UP	6	AGR2|CREB3L1|CRIP1|FOXA3|HGD|KRT8	1.60426295807e-05	5	3.20723758359e-05	AZGP1|GDF15|GJB1|PNPLA2|TCEAL1	5	1.28833255703e-08	CXCL3|INSR|LAMC2|LYZ|TSPAN8
YEGNASUBRAMANIAN_PROSTATE_CANCER	8	ABHD2|AGR2|SERPINA1|SLC44A4|SPDEF|TNNT1|UGT2B15|UGT2B28	0.000126256327053	21	3.25973232906e-05	ALDH3A2|ARHGEF26|AZGP1|BBS4|BCOR|CLGN|CRISP3|DHRS2|EEF1A2|ERBB3|FGF13|HMGN5|MCCC2|NEBL|NKX3-1|PBLD|SHTN1|SLC25A21|SORD|TOX3|TRIM36	9	0.000219915330815	ACPP|CLCN4|GPR37|HPCAL1|HPGD|PRSS2|SLC39A8|TMPRSS2|TSPAN8
ZWANG_EGF_INTERVAL_DN	6	BCAR3|C1ORF210|CRACR2A|DUSP10|ETFDH|FAM214A	0.000622625869171	31	0.000333482615234	AKAP9|AR|ARHGEF37|BMP4|CFAP69|CXXC5|CYB5D2|EHF|FBXO2|HES1|IRX3|KAT6B|KCNS3|KIAA1191|MADD|NINJ1|PARD6B|PHACTR3|PIH1D2|PIK3R1|PPDPF|PYCARD|RHOB|RHOD|RNF44|SFT2D3|SREBF1|TMEM125|TNFSF10|TRERF1|WNT9A	15	0.000911769123107	C1ORF106|CA2|CLN3|EMP2|GJB3|KLF3|KLK10|MATN2|MMP28|NOS2|OSBPL7|OVOL2|PLD1|RPS6KA5|SLPI
apical plasma membrane [GoID:GO:0016324; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	9	ATP1B1|CIB1|MTCL1|MUC1|SHROOM3|SLC1A1|SLC22A18|SLC44A4|TNIK	0.000295304468047	38	0.000589824461226	ABCC6|AHCYL1|AKR1A1|ATP7A|CACNB3|CFAP126|ERBB3|GPR143|HPN|IGFBP2|ITPK1|KCNE4|KCNMA1|LRP2|MARVELD2|MREG|PARD6B|PATJ|PDZK1|PFKM|PKHD1|PROM2|RAB17|RAB27B|SCNN1A|SHROOM2|SLC4A7|SLC9A3R1|SLC12A2|SLC22A4|SLC22A5|SLC23A1|SLC26A3|SLC46A1|STC1|STK39|STXBP2|UMOD	26	7.84474867605e-07	ABCG2|ABCG5|CD44|CRB3|DLL1|DPP4|DUOX2|EMP2|GIF|HIP1R|JAG1|KCNK1|MUC13|MUC17|MYO1A|P2RY1|PDE4D|PLD1|PROM1|PTPRH|RAB27A|SI|SLC2A1|SLC6A20|TMEM30A|UPK3A
calcium-dependent phospholipid binding [GoID:GO:0005544; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	3	SYTL1|SYTL2|SYTL5	0.000254074599848	10	0.000462367866159	ANXA9|ANXA11|C2CD5|DOC2A|RPH3AL|SYT1|SYT9|SYT12|SYT17|SYTL4	7	4.57813335364e-05	ANXA2|ANXA2P2|ANXA3|ANXA10|ANXA13|PLA2G4A|SYT13
columnar_cuboidal epithelial cell differentiation [GoID:GO:0002065; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	7	AGR2|FGFR2|FOXA1|INSM1|PTK6|SLITRK6|SPDEF	0.000144991494963	16	0.000228137441268	ASCL1|B9D1|BMP4|CLOCK|EMX1|HES1|LEF1|LRTOMT|MCOLN3|RARA|RBPJ|RXRA|SLC4A7|SLC9A3R1|STRC|WNT4	9	6.18455486571e-05	ATOH1|BMP2|CDKN1A|CLIC5|DLL1|GATA6|JAG1|NKX2-2|SIDT2
